Genome

Xanthomonas campestris Causes black rot disease in crucifers Lineage: Bacteria[37515]; Pseudomonadota[11108]; Gammaproteobacteria[4595]; Lysobacterales[357]; Lysobacteraceae[253]; Xanthomonas[41]; Xanthomonas campestris[1]

Xanthomonas. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. Xanthomonas campestris More.... This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry. Less...

Summary Sequence data:  genome assemblies: 478; sequence reads: 1  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 5.01397  median protein count: 4123  median GC%: 65.0985 Publications (limited to 20 most recent records) Complete Genome Sequence of a Copper-Resistant Xanthomonas campestris pv. campestris Strain Isolated from Broccoli in Mauritius Suggests Adaptive Gene Gain Through Horizontal Gene Transfer. Boyer C, et al. Phytopathology 2024 Feb Whole Genome Sequencing-Based Tracing of a 2022 Introduction and Outbreak of Xanthomonas hortorum pv. pelargonii. Iruegas-Bocardo F, et al. Phytopathology 2023 Jun Complete Genome Sequence of Xanthomonas campestris pv. campestris SB80, a Race 4 Strain Isolated from White Head Cabbage in Turkey. Erken Meral S, et al. Microbiol Resour Announc 2022 Mar 17 Cruciferous Weed Isolates of Xanthomonas campestris Yield Insight into Pathovar Genomic Relationships and Genetic Determinants of Host and Tissue Specificity. Dubrow ZE, et al. Mol Plant Microbe Interact 2022 Sep Temporal dynamics of bacterial communities during seed development and maturation. Chesneau G, et al. FEMS Microbiol Ecol 2020 Nov 26 Two-way mixed-effects methods for joint association analysis using both host and pathogen genomes. Wang M, et al. Proc Natl Acad Sci U S A 2018 Jun 12 Genome Sequences of the Race 1 and Race 4 Xanthomonas campestris pv. campestris Strains CFBP 1869 and CFBP 5817. Bolot S, et al. Genome Announc 2015 Sep 17 Draft Genome Sequences of Two New Zealand Xanthomonas campestris pv. campestris Isolates, ICMP 4013 and ICMP 21080. Desai D, et al. Genome Announc 2015 Oct 29 Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome. Roux B, et al. BMC Genomics 2015 Nov 18 Complete Genome Sequence of Xanthomonas campestris pv. campestris Strain 17 from Taiwan. Liu YC, et al. Genome Announc 2015 Dec 17 Genome sequence of Xanthomonas campestris JX, an industrially productive strain for Xanthan gum. Tao F, et al. J Bacteriol 2012 Sep Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp. Bogdanove AJ, et al. J Bacteriol 2011 Oct The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. Vorhölter FJ, et al. J Biotechnol 2008 Mar 20 Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris. Qian W, et al. Genome Res 2005 Jun Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. da Silva AC, et al. Nature 2002 May 23 More...  Representative (genome information for reference and representative genomes) Reference genome:   Xanthomonas campestris pv. raphani Submitter: National Agriculture and Food Research Organization (NARO) Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr - NZ_CP058243.1 CP058243.1 4.94 65.3 4,056 6 53 90 4,272 67 Dendrogram (based on genomic BLAST) External Resources Plant Path XGR