Genome

Drosophila ananassae The fruit fly Drosophila ananassae is a member of the melanogaster group of the subgenus Sophophora Lineage: Eukaryota[15558]; Metazoa[7784]; Ecdysozoa[3516]; Arthropoda[3302]; Hexapoda[2974]; Insecta[2840]; Pterygota[2838]; Neoptera[2819]; Endopterygota[2629]; Diptera[678]; Brachycera[564]; Muscomorpha[552]; Ephydroidea[334]; Drosophilidae[331]; Drosophila[254]; Sophophora[111]; melanogaster group[80]; ananassae subgroup[14]; ananassae species complex[2]; Drosophila ananassae[1]

The fruit fly Drosophila ananassae is a member of the melanogaster group of the subgenus Sophophora and one of 12 fruit fly species whose genomes were sequenced for use in comparative genomics studies. The whole genome sequences combined with previous information on the phylogenetic relationship between these species provides a resource More...to aid in studies of molecular evolution, gene function and comparative annotation across the entire Drosophila genus. Twenty fruit fly species have been approved for construction of BAC libraries, which will further assist in expanding our knowledge of gene homologies and pathway discovery. Less...

Summary Sequence data:  genome assemblies: 7; sequence reads: 7  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 213.818  median protein count: 23553  median GC%: 41.9 NCBI Annotation Release:  102 Publications (limited to 20 most recent records) Comparison of long-read sequencing technologies in interrogating bacteria and fly genomes. Tvedte ES, et al. G3 (Bethesda) 2021 Jun 17 Highly contiguous assemblies of 101 drosophilid genomes. Kim BY, et al. Elife 2021 Jul 19 Assembly reconciliation. Zimin AV, et al. Bioinformatics 2008 Jan 1 Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature 2007 Nov 8 The Y chromosomal fertility factor Threads in Drosophila hydei harbors a functional gene encoding an axonemal dynein beta heavy chain protein. Kurek R, et al. Genetics 1998 Jul More...  Representative (genome information for reference and representative genomes) Reference genome:   Drosophila ananassae ASM1763931v2 Submitter: National Center for Biotechnology Information Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr 2L NC_057927.1 CM029943.2 30.67 42.8 6,024 - 73 459 3,795 30 Chr 2R NC_057928.1 CM029944.2 27.16 42.5 4,832 - 42 410 3,018 15 Chr 3L NC_057929.1 CM033063.1 26.43 43.2 5,153 - 102 357 3,106 10 Chr 3R NC_057930.1 CM033064.1 28.81 41.8 4,546 116 45 415 3,166 29 Chr XL NC_057931.1 CM029945.2 20.57 42.8 2,603 - 17 232 1,607 7 Chr XR NC_057932.1 CM029946.2 22.16 40.3 1,709 - 21 292 1,108 13 MT - CM029947.1 0.02 21.6 - - - - - - Un - . - 58.02 40.6 1,048 60 111 374 1,182 89 Chromosomes Click on chromosome name to open Genome Data Viewer External Resources AAA - 12 Drosophila Genomes Agencourt Bioscience Corporation Drosophila Genomics Resource Center Drosophila Heterochromatin Genome Project Drosophila Population Genomic Project FlyBase OrthoDB Riken Genomic Sciences Center The Interactive Fly Trans-NIH Fly Initiative UCSD Drosophila Species Stock Center