Nematolebias whitei (ID 95901) - Genome - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Nematolebias whitei (Rio pearlfish)
Representative genome: Nematolebias whitei (assembly NemWhi1)
Download sequences in FASTA format for genome, transcript, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Nematolebias whitei genome, transcript, protein

Display Settings:

Overview

Format

Summary

Send to:

Choose Destination

File
Clipboard
Collections

Links from Gene

ID: 95901

Organism Overview

Nematolebias whitei (Rio pearlfish)

Nematolebias whitei overview

Lineage: Eukaryota[15558]; Metazoa[7784]; Chordata[3583]; Craniata[3548]; Vertebrata[3548]; Euteleostomi[3503]; Actinopterygii[1304]; Neopterygii[1295]; Teleostei[1292]; Neoteleostei[923]; Acanthomorphata[917]; Ovalentaria[397]; Atherinomorphae[117]; Cyprinodontiformes[68]; Rivulidae[16]; Nematolebias[2]; Nematolebias whitei[1]

Summary

Submitter:

Michigan State University

Assembly level:

Chromosome

Assembly:

GCA_014905685.2 NemWhi1 scaffolds: 18,998 contigs: 119,519 N50: 19,984 L50: 15,690

BioProjects:

Whole Genome Shotgun (WGS):

INSDC: JAAMPK000000000.1

Statistics:

total length (Mb): 1218.32

protein count: 24104

GC%: 41.7763

NCBI Annotation Release:

Replicon Info

Loc	Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
	Chr	1	NC_056498.1	CM029733.1	95.15	41.7	1,599	2	86	105	1,672	43

	Chr	2	NC_056499.1	CM029734.1	62.66	41.6	1,024	3	17	42	968	16

	Chr	3	NC_056500.1	CM029735.1	61.19	41.6	1,287	2	19	65	1,233	10

	Chr	4	NC_056501.1	CM029736.1	57.15	41.9	886	1	8	31	853	24

	Chr	5	NC_056502.1	CM029737.1	55.35	41.9	1,175	1	13	54	1,139	16

	Chr	6	NC_056503.1	CM029738.1	53.29	41.5	1,056	-	26	48	1,048	28

	Chr	7	NC_056504.1	CM029739.1	52.98	41.6	1,267	-	17	45	1,181	19

	Chr	8	NC_056505.1	CM029740.1	52.89	41.7	1,192	-	15	41	1,122	14

	Chr	9	NC_056506.1	CM029741.1	52.79	41.9	1,108	-	36	48	1,066	13

	Chr	10	NC_056507.1	CM029742.1	51.35	41.8	1,144	-	13	53	1,092	20

	Chr	11	NC_056508.1	CM029743.1	49.98	41.6	1,195	-	12	44	1,121	22

	Chr	12	NC_056509.1	CM029744.1	49.67	42.0	909	2	19	59	882	18

	Chr	13	NC_056510.1	CM029745.1	48.47	41.6	972	1	7	43	905	17

	Chr	14	NC_056511.1	CM029746.1	47.7	41.6	1,021	2	21	46	1,007	17

	Chr	15	NC_056512.1	CM029747.1	47.01	41.9	1,216	-	24	61	1,154	9

	Chr	16	NC_056513.1	CM029748.1	46.05	41.9	973	-	26	42	940	20

	Chr	17	NC_056514.1	CM029749.1	42.8	41.8	929	2	16	35	874	12

	Chr	18	NC_056515.1	CM029750.1	41.41	41.5	902	-	1	48	849	8

	Chr	19	NC_056516.1	CM029751.1	41.1	41.5	928	1	8	54	903	10

	Chr	20	NC_056517.1	CM029752.1	40.97	41.6	671	-	7	31	644	14

	Chr	21	NC_056518.1	CM029753.1	35.64	41.6	984	1	7	33	915	16

	Chr	22	NC_056519.1	CM029754.1	32.53	41.3	629	-	9	34	608	8

	Chr	23	NC_056520.1	CM029755.1	25.03	41.6	483	1	25	19	469	9

	Chr	24	NC_056521.1	CM029756.1	2.65	43.7	31	-	1	3	33	2

	Un	-	.	-	72.51	43.0	523	12	103	134	776	27

Chromosomes

Click on chromosome name to open Genome Data Viewer

Supplemental Content

NCBI Resources

Genome Data Viewer
Genome Data Viewer

Tools

BLAST Genome
BLAST Genome

Related information

Assembly
Related Assembly records
BioProject
Related BioProjects
Gene
Related Gene
Components
Constituent nucleotide sequence
Protein
Constituent protein sequence
Taxonomy
Taxonomy sequences associated with genome record

Recent activity

Clear Turn Off Turn On

Nematolebias whitei
Nematolebias whitei

Genome
Genome Links for Gene (Select 119412625) (1)
Genome
Breast cancer: histologically normal breast epithelium
Breast cancer: histologically normal breast epithelium
Accession: GDS3139

GEO DataSets
Related DataSets for GEO Profiles (Select 49756848) (1)
GEO DataSets

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genomes & Maps > Genome