Genome

Tetrapisispora phaffii A killer yeast used against spoilage yeasts Lineage: Eukaryota[15558]; Fungi[5219]; Dikarya[4852]; Ascomycota[3866]; Saccharomycotina[1194]; Saccharomycetes[1194]; Saccharomycetales[1193]; Saccharomycetaceae[156]; Tetrapisispora[8]; Tetrapisispora phaffii[1]

RefSeq genome sequence from ex-type culture. Killer yeasts are being used to control contaminating wild-type yeasts in the winemaking and fermentation industries, to control pathogenic fungi in plants, and to develop novel antifungal agents for the treatment of human and animal fungal infections. T. phaffii secretes a glycoprotein known as the More...killer toxin Kpkt that is lethal to spoilage yeasts under winemaking conditions. The toxin is a highly specific beta-1,3-glucanase that disrupts the integrity of the yeast cell wall. Less...

Summary Sequence data:  genome assemblies: 2  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 12.1151  median protein count: 5252  median GC%: 33.5883 Publications (limited to 20 most recent records) Genomic and ecological factors shaping specialism and generalism across an entire subphylum. Opulente DA, et al. bioRxiv 2023 Sep 8 Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum. Shen XX, et al. Cell 2018 Nov 29 Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A 2011 Dec 13  Representative (genome information for reference and representative genomes) Reference genome:   Tetrapisispora phaffii CBS 4417 Submitter: Wolfe Laboratory, Smurfit Institute of Genetics, Trinity College Dublin, Ireland Loc Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Chr 1 NC_016520.1 HE612856.1 1.38 32.8 588 - 26 - 614 Chr 2 NC_016521.1 HE612857.1 1.16 33.1 484 - 19 - 503 Chr 3 NC_016522.1 HE612858.1 1.1 32.6 486 - 15 - 501 Chr 4 NC_016523.1 HE612859.1 1.04 33.2 454 - 19 - 473 Chr 5 NC_016524.1 HE612860.1 0.85 32.8 390 - 11 - 401 Chr 6 NC_016525.1 HE612861.1 0.82 33.6 354 - 9 - 363 Chr 7 NC_016526.1 HE612862.1 0.81 33.5 369 - 10 - 379 Chr 8 NC_016527.1 HE612863.1 0.75 33.3 297 - 9 - 306 Chr 9 NC_016528.1 HE612864.1 0.74 33.8 318 5 12 - 335 Chr 10 NC_016529.1 HE612865.1 0.71 34.2 309 - 12 - 321 Chr 11 NC_016530.1 HE612866.1 0.54 34.6 226 - 14 - 240 Chr 12 NC_016531.1 HE612867.1 0.5 35.0 218 - 8 - 226 Chr 13 NC_016532.1 HE612868.1 0.45 34.2 204 - 8 - 212 Chr 14 NC_016533.1 HE612869.1 0.43 35.1 190 - 8 - 198 Chr 15 NC_016534.1 HE612870.1 0.41 34.2 186 - 17 - 203 Chr 16 NC_016535.1 HE612871.1 0.39 35.8 176 - 8 - 184 Un - . - 0.01 36.8 3 - - - 3 Chromosomes Click on chromosome name to open Genome Data Viewer