Sequence data: | genome assemblies: 8; sequence reads: 3 | (See Genome Assembly and Annotation report) | | Statistics: | median total length (Mb): 2250.66 | median protein count: 72164 | median GC%: 43.4596 | NCBI Annotation Release: | 101 |
Reference genome: -
Oncorhynchus mykiss USDA_OmykA_1.1
Loc
|
Type
|
Name
|
RefSeq
|
INSDC
|
Size (Mb)
|
GC%
|
Protein
|
rRNA
|
tRNA
|
Other RNA
|
Gene
|
Pseudogene
|
---|
| Chr | 1 | NC_048565.1 | CM023219.2 | 95.77 | 43.2 | 3,699 | - | 11 | 428 | 1,798 | 69 | | | Chr | 2 | NC_048566.1 | CM023220.2 | 103.81 | 43.5 | 4,829 | - | 124 | 550 | 2,531 | 91 | | | Chr | 3 | NC_048567.1 | CM023221.2 | 85.31 | 43.4 | 4,015 | - | 17 | 345 | 1,946 | 87 | | | Chr | 4 | NC_048568.1 | CM023222.3 | 46.84 | 43.3 | 1,777 | - | 9 | 175 | 884 | 30 | | | Chr | 5 | NC_048569.1 | CM023223.2 | 100.8 | 43.4 | 4,460 | - | 24 | 433 | 2,077 | 64 | | | Chr | 6 | NC_048570.1 | CM023224.2 | 101.1 | 43.5 | 4,189 | - | 92 | 525 | 2,191 | 81 | | | Chr | 7 | NC_048571.1 | CM023225.2 | 90.92 | 43.4 | 4,114 | 6 | 64 | 346 | 2,030 | 78 | | | Chr | 8 | NC_048572.1 | CM023226.2 | 91.62 | 43.2 | 3,943 | 2 | 257 | 382 | 2,159 | 63 | | | Chr | 9 | NC_048573.1 | CM023227.2 | 79.46 | 43.4 | 3,612 | - | 404 | 440 | 2,197 | 66 | | | Chr | 10 | NC_048574.1 | CM023228.2 | 87.81 | 43.3 | 3,956 | - | 186 | 588 | 2,328 | 87 | | | Chr | 11 | NC_048575.1 | CM023229.2 | 86.28 | 43.4 | 3,249 | 2 | 140 | 307 | 1,679 | 60 | | | Chr | 12 | NC_048576.1 | CM023230.2 | 102.85 | 43.2 | 4,757 | 38 | 127 | 518 | 2,645 | 95 | | | Chr | 13 | NC_048577.1 | CM023231.2 | 73.33 | 43.6 | 3,975 | 53 | 21 | 490 | 2,420 | 86 | | | Chr | 14 | NC_048578.1 | CM023232.3 | 43.31 | 43.3 | 1,641 | - | 8 | 169 | 814 | 22 | | | Chr | 15 | NC_048579.1 | CM023233.2 | 81.57 | 43.8 | 3,111 | 2 | 505 | 365 | 1,962 | 51 | | | Chr | 16 | NC_048580.1 | CM023234.2 | 78.54 | 43.6 | 3,673 | 2 | 484 | 346 | 2,198 | 57 | | | Chr | 17 | NC_048581.1 | CM023235.2 | 95.21 | 43.3 | 4,611 | - | 313 | 669 | 2,980 | 96 | | | Chr | 18 | NC_048582.1 | CM023236.2 | 74.66 | 43.9 | 3,708 | - | 142 | 300 | 1,853 | 70 | | | Chr | 19 | NC_048583.1 | CM023237.2 | 67.24 | 43.4 | 2,829 | - | 465 | 327 | 1,914 | 46 | | | Chr | 20 | NC_048584.1 | CM023238.2 | 46.62 | 43.3 | 1,697 | 375 | 334 | 219 | 1,598 | 51 | | | Chr | 21 | NC_048585.1 | CM023239.2 | 64.94 | 44.0 | 2,760 | - | 600 | 363 | 1,976 | 46 | | | Chr | 22 | NC_048586.1 | CM023240.2 | 52.47 | 43.1 | 1,898 | - | 51 | 367 | 1,052 | 48 | | | Chr | 23 | NC_048587.1 | CM023241.2 | 62.88 | 43.2 | 2,100 | - | 81 | 223 | 1,024 | 39 | | | Chr | 24 | NC_048588.1 | CM023242.2 | 45.93 | 44.0 | 1,888 | - | 16 | 166 | 942 | 38 | | | Chr | 25 | NC_048589.1 | CM023243.3 | 47.54 | 43.5 | 1,724 | - | 4 | 211 | 911 | 44 | | | Chr | 26 | NC_048590.1 | CM023244.2 | 51.11 | 43.9 | 2,053 | 1 | 70 | 341 | 1,033 | 25 | | | Chr | 27 | NC_048591.1 | CM023245.2 | 51.56 | 43.9 | 2,098 | - | 17 | 206 | 1,037 | 46 | | | Chr | 28 | NC_048592.1 | CM023246.2 | 43.72 | 43.1 | 2,001 | - | 400 | 226 | 1,358 | 26 | | | Chr | 30 | NC_050570.1 | CM025857.1 | 46.33 | 43.1 | 1,846 | - | 13 | 314 | 1,048 | 48 | | | Chr | 31 | NC_050571.1 | CM025858.1 | 44.11 | 43.6 | 1,623 | - | 391 | 168 | 1,184 | 18 | | | Chr | 32 | NC_050572.1 | CM025859.1 | 41.84 | 43.6 | 1,845 | - | 16 | 184 | 890 | 24 | | | Chr | Y | NC_048593.1 | CM023247.2 | 47.75 | 43.5 | 1,897 | 111 | 55 | 428 | 1,421 | 97 | | | | MT | NC_001717.1 | - | 0.02 | 46.0 | 13 | 2 | 22 | - | 37 | - | | | Un | - | . | - | 108.45 | 44.0 | 2,152 | 8,484 | 7,063 | 1,344 | 18,680 | 863 | |
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