Streptococcus pseudopneumoniae (ID 3199) - Genome - NCBI

Warning: The NCBI web site requires JavaScript to function. more...

Streptococcus pseudopneumoniae
Representative genome: Streptococcus pseudopneumoniae IS7493
Download sequences in FASTA format for genome, protein
Download genome annotation in GFF, GenBank or tabular format
BLAST against Streptococcus pseudopneumoniae genome, protein
All 119 genomes for species:
Browse the list
Download sequence and annotation from RefSeq or GenBank

Display Settings:

Overview

Format

Summary

Send to:

Choose Destination

File
Clipboard
Collections

Links from Assembly

ID: 3199

Organism Overview ; Genome Assembly and Annotation report [119] ; Genome Tree report [89] ; Plasmid Annotation Report [1]

Streptococcus pseudopneumoniae

Streptococcus pseudopneumoniae overview

Lineage: Bacteria[37505]; Bacillota[6130]; Bacilli[2619]; Lactobacillales[872]; Streptococcaceae[167]; Streptococcus[127]; Streptococcus pseudopneumoniae[1]

Summary

Sequence data:

genome assemblies: 119; sequence reads: 2

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 2.17262

median protein count: 2020

median GC%: 39.8

Publications (limited to 20 most recent records)

Streptococcus pseudopneumoniae: Use of Whole-Genome Sequences To Validate Species Identification Methods. Jensen CS, et al. J Clin Microbiol 2021 Jan 21
Identification of Streptococcus pseudopneumoniae and other mitis group streptococci using matrix assisted laser desorption/ionization - time of flight mass spectrometry. Jensen CS, et al. Diagn Microbiol Infect Dis 2021 Nov
Upregulation of the PatAB Transporter Confers Fluoroquinolone Resistance to Streptococcus pseudopneumoniae. Alvarado M, et al. Front Microbiol 2017
The mystery of the fourth clone: comparative genomic analysis of four non-typeable Streptococcus pneumoniae strains with different susceptibilities to optochin. Ikryannikova LN, et al. Eur J Clin Microbiol Infect Dis 2016 Jan
Draft Genome Sequence of Streptococcus gordonii Type Strain CCUG 33482T. Salvà-Serra F, et al. Genome Announc 2016 Mar 24
Septicemia with Streptococcus pseudopneumoniae: report of three cases with an apparent hepatic or bile duct association. Fuursted K, et al. Infect Dis (Lond) 2016 Aug
Draft Genome Sequence of Moraxella catarrhalis Type Strain CCUG 353T. Jakobsson HE, et al. Genome Announc 2016 Jun 16
A multifaceted 'omics' approach for addressing the challenge of antimicrobial resistance. Cohen A, et al. Future Microbiol 2015
Proteotyping: Proteomic characterization, classification and identification of microorganisms--A prospectus. Karlsson R, et al. Syst Appl Microbiol 2015 Jun
A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota. Roach DJ, et al. PLoS Genet 2015 Jul
Dense genomic sampling identifies highways of pneumococcal recombination. Chewapreecha C, et al. Nat Genet 2014 Mar
Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes. Chewapreecha C, et al. PLoS Genet 2014 Aug
Whole-genome sequence of Streptococcus pseudopneumoniae isolate IS7493. Shahinas D, et al. J Bacteriol 2011 Nov

Representative (genome information for reference and representative genomes)

Reference genome:

Streptococcus pseudopneumoniae IS7493

Submitter: Public Health Laboratory- Toronto

Morphology: Gram:Positive, Shape:Cocci

Type	Name	RefSeq	INSDC	Size (Mb)	GC%	Protein	rRNA	tRNA	Other RNA	Gene	Pseudogene
Chr	-	NC_015875.1	CP002925.1	2.19	39.8	2,065	3	41	3	2,282	170

Plsm	pDRPIS7493	NC_015876.1	CP002926.1	0	38.3	4	-	-	-	4	-

Dendrogram (based on genomic BLAST)

Supplemental Content

Tools

BLAST Genome
BLAST Genome

Related information

Assembly
Related Assembly records
BioProject
Related BioProjects
Gene
Related Gene
Components
Constituent nucleotide sequence
Protein
Constituent protein sequence
PubMed
PubMed articles cited by genome record
Taxonomy
Taxonomy sequences associated with genome record

Recent activity

Clear Turn Off Turn On

Streptococcus pseudopneumoniae
Streptococcus pseudopneumoniae

Genome
Genome for Assembly (Select 477168) (1)
Genome

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI > Genomes & Maps > Genome