Solanum americanum (ID 55990) - Genome - NCBI

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Solanum americanum
Representative genome: Solanum americanum (assembly ASM3040738v1)
BLAST against Solanum americanum genome
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ID: 55990

Organism Overview ; Genome Assembly and Annotation report [10]

Solanum americanum

Solanum americanum overview

Lineage: Eukaryota[15557]; Viridiplantae[1758]; Streptophyta[1641]; Embryophyta[1630]; Tracheophyta[1603]; Spermatophyta[1585]; Magnoliopsida[1558]; eudicotyledons[1256]; Gunneridae[1256]; Pentapetalae[1256]; asterids[386]; lamiids[250]; Solanales[92]; Solanaceae[83]; Solanoideae[67]; Solaneae[57]; Solanum[56]; Solanum americanum[1]

Solanum americanum genome reference project

Summary

Sequence data:

genome assemblies: 10

(See Genome Assembly and Annotation report)

Statistics:

median total length (Mb): 9.42473

median protein count: 0

median GC%: 36.4396

Publications (limited to 20 most recent records)

Chromosome-scale assembly and gene editing of Solanum americanum genome reveals the basis for thermotolerance and fruit anthocyanin composition. Yu S, et al. Theor Appl Genet 2024 Jan 7
Accelerated cloning of a potato late blight-resistance gene using RenSeq and SMRT sequencing. Witek K, et al. Nat Biotechnol 2016 Jun

Representative (genome information for reference and representative genomes)

Reference genome:

Solanum americanum ASM3040738v1

Loc	Type	Name	RefSeq	INSDC	Size (Mb)	GC%
		master WGS	-	JATABZ000000000.1	1,080.16	36.5

	Chr	1	-	CM059534.1	113.12	36.2

	Chr	2	-	CM059535.1	68.87	35.9

	Chr	3	-	CM059536.1	91.93	36.4

	Chr	4	-	CM059537.1	91.93	36.4

	Chr	5	-	CM059538.1	91.08	36.7

	Chr	6	-	CM059539.1	72.96	35.9

	Chr	7	-	CM059540.1	87.68	36.3

	Chr	8	-	CM059541.1	80.73	36.2

	Chr	9	-	CM059542.1	88.3	36.5

	Chr	10	-	CM059543.1	84.22	36.6

	Chr	11	-	CM059544.1	90.71	36.5

	Chr	12	-	CM059545.1	92.67	36.6

Chromosomes

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