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Comparative Genome Viewer

Find a gene in this alignment

Go to dotplot view
Danio rerio Zv7 (GCF_000002035.1)
Danio rerio GRCz11 (GCF_000002035.6)


Adjust your view
Reciprocal best placed alignments (forward and reverse) are shown by default.
Adjust minimum alignment size by moving the slider
Minimum alignment size (bp): 10000
{
    "state": 0,
    "count": 3,
    "sort": "orderByChrom",
    "target": ["connector"]
}

Colored connector lines represent reciprocal best placed alignments between assemblies.

{
    "state": 0,
    "target": ["anchor-chrom", "target-chrom"]
}

Click on a chromosome to zoom.

{
    "state": [1,2],
    "count": 2,
    "sort": "orderConnectors",
    "target": ["connector"]
}

Click on an alignment block to see details.
Double-click on alignment block to zoom in to region.

{
    "state": [1,2],
    "target": ["connector-wrap"]
}

Mouse-scroll or pinch to zoom within the view, or drag to pan.

{
    "state": [1,2],
    "count": 2,
    "target": ["axis", "zoomed-chrom"]
}

Drag over the ruler or chromosome bar to zoom to a specific region.

{
    "state": [1,2],
    "count": 2,
    "target": ["zoom-control"]
}

Go back or zoom out using these arrows.

{
    "state": [1,2],
    "count": 2,
    "target": ["about"]
}

For more details check these help links.

{
    "global": 1,
    "version": 0
}