| Species | RefSeq assembly(ies) | Annotation Release | Freeze Date | Status |
|---|---|---|---|---|
| Lepisosteus oculatus (spotted gar) | fLepOcu1.hap2 (GCF_040954835.1) | GCF_040954835.1-RS_2024_09 | 2024-09-13 | In sequence databasesOn the FTP |
| Neodiprion pinetum (white pine sawfly) | iyNeoPine1.2 (GCF_021155775.2) | GCF_021155775.2-RS_2024_10 | 2024-10-11 | In sequence databasesOn the FTP |
| Argopecten irradians (bay scallop) | Ai_NY (GCF_041381155.1) | GCF_041381155.1-RS_2024_10 | 2024-10-11 | In sequence databasesOn the FTP |
| Bombus flavifrons (bees) | iyBomFlav1_principal (GCF_040668555.1) | GCF_040668555.1-RS_2024_10 | 2024-10-11 | In sequence databasesOn the FTP |
| Embiotoca jacksoni (black perch) | fEmbJac1.0.p (GCF_022577435.1) | GCF_022577435.1-RS_2024_10 | 2024-10-11 | In sequence databasesOn the FTP |
Eukaryotic RefSeq Genome Annotation Status
NCBI uses an automated pipeline to provide annotation on some RefSeq genome records. This page provides information about:
- Eukaryotic RefSeq genomes currently in the NCBI annotation pipeline
- Eukaryotic RefSeq genome annotations that were recently released
Another page shows all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each. If you do not see your genome of interest in these tables, please read the annotation policy and then make an annotation request.
Annotation runs in progress
An annotation run is marked in progress until the data produced is available in the sequence databases, in Gene and on the FTP site.
Recently completed annotation runs
Genomes annotated in the past 6 weeks.
FTP - FTP DownloadB - Organism-specific BLASTAR - Annotation ReportGDV - Genome Data Viewer
| Species | RefSeq assembly(ies) | Annotation Release | Freeze Date | Release Date | Links | |||
|---|---|---|---|---|---|---|---|---|
| Petaurus breviceps papuanus (sugar glider) | PetGlider_PUasm1.0 (GCF_028583685.1) | GCF_028583685.1-RS_2024_10 | 2024-10-11 | 2024-10-12 | FTP | B | AR | GDV |
| Tenebrio molitor (yellow mealworm) | icTenMoli1.1 (GCF_963966145.1) | GCF_963966145.1-RS_2024_10 | 2024-10-03 | 2024-10-08 | FTP | B | AR | GDV |
| Brachionichthys hirsutus (bony fishes) | CSIRO-AGI_Bhir_v1 (GCF_040956055.1) | GCF_040956055.1-RS_2024_09 | 2024-09-23 | 2024-10-05 | FTP | B | AR | GDV |
| Aphelocoma coerulescens (scrub jay) | UR_Acoe_1.0 (GCF_041296385.1) | GCF_041296385.1-RS_2024_10 | 2024-10-04 | 2024-10-05 | FTP | B | AR | GDV |
| Capricornis sumatraensis (Sumatran serow) | serow.2 (GCF_032405125.1) | GCF_032405125.1-RS_2024_10 | 2024-10-04 | 2024-10-05 | FTP | B | AR | GDV |
| Struthio camelus (African ostrich) | bStrCam1.hap1 (GCF_040807025.1) | GCF_040807025.1-RS_2024_10 | 2024-10-02 | 2024-10-04 | FTP | B | AR | GDV |
| Montipora capricornis (stony corals) | ASM3666992v2 (GCF_036669925.1) | GCF_036669925.1-RS_2024_09 | 2024-09-25 | 2024-09-30 | FTP | B | AR | GDV |
| Montipora foliosa (stony corals) | ASM3666993v2 (GCF_036669935.1) | GCF_036669935.1-RS_2024_09 | 2024-09-27 | 2024-09-30 | FTP | B | AR | GDV |
| Aristolochia californica (flowering plants) | dmAriCali1.0.hap1 (GCF_029961685.1) | GCF_029961685.1-RS_2024_09 | 2024-09-26 | 2024-09-28 | FTP | B | AR | GDV |
| Battus philenor (pipe-vine swallowtail) | ilBatPhil1.0.hap1 (GCF_028537555.1) | GCF_028537555.1-RS_2024_09 | 2024-09-24 | 2024-09-25 | FTP | B | AR | GDV |
| Cebidichthys violaceus (monkeyface prickleback) | fCebVio1.0.p (GCF_023349555.1) | GCF_023349555.1-RS_2024_09 | 2024-09-20 | 2024-09-23 | FTP | B | AR | GDV |
| Syngnathus scovelli (Gulf pipefish) | RoL_Ssco_1.2 (GCF_024217435.2) | GCF_024217435.2-RS_2024_09 | 2024-09-18 | 2024-09-23 | FTP | B | AR | GDV |
| Phaseolus vulgaris (eudicots) | P. vulgaris v2.0 (GCF_000499845.2) | GCF_000499845.2-RS_2024_09 | 2024-09-16 | 2024-09-23 | FTP | B | AR | GDV |
| Lonchura striata (white-rumped munia) | lonStrDom2 (GCF_005870125.1) | GCF_005870125.1-RS_2024_09 | 2024-09-20 | 2024-09-23 | FTP | B | AR | GDV |
| Anas acuta (northern pintail) | bAnaAcu1.1 (GCF_963932015.1) | GCF_963932015.1-RS_2024_09 | 2024-09-19 | 2024-09-23 | FTP | B | AR | GDV |
| Clinocottus analis (woolly sculpin) | fCliAna1.0.p (GCF_023055335.1) | GCF_023055335.1-RS_2024_09 | 2024-09-18 | 2024-09-19 | FTP | AR | GDV | |
| Pyrus communis (pear) | drPyrComm1.1 (GCF_963583255.1) | GCF_963583255.1-RS_2024_09 | 2024-09-18 | 2024-09-19 | FTP | B | AR | GDV |
| Eschrichtius robustus (grey whale) | mEscRob2.pri (GCF_028021215.1) | GCF_028021215.1-RS_2024_09 | 2024-09-18 | 2024-09-19 | FTP | B | AR | GDV |
| Nyctibius grandis (birds) | bNycGra1.pri (GCF_013368605.1) | GCF_013368605.1-RS_2024_09 | 2024-09-13 | 2024-09-17 | FTP | B | AR | GDV |
| Palaemon carinicauda (crustaceans) | ASM3689809v2 (GCF_036898095.1) | GCF_036898095.1-RS_2024_09 | 2024-09-11 | 2024-09-16 | FTP | B | AR | GDV |
| Antennarius striatus (striated frogfish) | ASM4005453v1 (GCF_040054535.1) | GCF_040054535.1-RS_2024_09 | 2024-09-13 | 2024-09-14 | FTP | B | AR | GDV |
| Drosophila tropicalis (flies) | ASM1815108v1 (GCF_018151085.1) | GCF_018151085.1-RS_2024_09 | 2024-09-12 | 2024-09-13 | FTP | B | AR | GDV |
| Alexandromys fortis (reed vole) | M_Fortis_MF-2015_v1.1 (GCF_014885135.2) | GCF_014885135.2-RS_2024_09 | 2024-09-12 | 2024-09-12 | FTP | B | AR | GDV |
| Hyperolius riggenbachi (Riggenbach's reed frog) | aHypRig1.pri (GCF_040937935.1) | GCF_040937935.1-RS_2024_08 | 2024-08-28 | 2024-09-10 | FTP | B | AR | GDV |
| Anabrus simplex (Mormon cricket) | ASM4041472v1 (GCF_040414725.1) | GCF_040414725.1-RS_2024_09 | 2024-09-05 | 2024-09-10 | FTP | B | AR | GDV |
| Anomalospiza imberbis (birds) | ASM3175350v1 (GCF_031753505.1) | GCF_031753505.1-RS_2024_07 | 2024-07-12 | 2024-09-10 | FTP | B | AR | GDV |
| Danio rerio (zebrafish) | GRCz11 (GCF_000002035.6) | GCF_000002035.6-RS_2024_08 | 2024-08-15 | 2024-09-08 | FTP | B | AR | GDV |
Tables showing all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each, are avaliable here.