Genome

Campylobacter upsaliensis Causes gastrointestinal disease Lineage: Bacteria[37515]; Campylobacterota[257]; Epsilonproteobacteria[228]; Campylobacterales[216]; Campylobacteraceae[54]; Campylobacter[49]; Campylobacter upsaliensis[1]

Campylobacter upsaliensis. This organism was originally isolated from a dog in an animal clinic in Upsala, Sweden, hence the species name. It is now known that this organism is a human enteropathogen like the related C. jejuni and C. coli. Normally this organism causes an acute self-limiting diarrhea but can also cause bacteremia More...and septicemia in immunocompromised individuals. More severe effects such as spontaneous abortion have also been associated with this organism. Less...

Summary Sequence data:  genome assemblies: 133  (See  Genome Assembly and Annotation report) Statistics:  median total length (Mb): 1.6441  median protein count: 1659  median GC%: 34.7 Publications (limited to 20 most recent records) Genetic characteristics and potential pathogenic agents in Campylobacter upsaliensis based on genomic analysis. Wang H, et al. Emerg Microbes Infect 2024 Dec Source attributed case-control study of campylobacteriosis in New Zealand. Lake RJ, et al. Int J Infect Dis 2021 Feb FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science. Sichtig H, et al. Nat Commun 2019 Jul 25 Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species. Fouts DE, et al. PLoS Biol 2005 Jan More...  Representative (genome information for reference and representative genomes) Reference genome:   Campylobacter upsaliensis Cu-17-M197059 Type Name RefSeq INSDC Size (Mb) GC% Protein rRNA tRNA Other RNA Gene Pseudogene Chr 1 NZ_OU701459.1 OU701459.1 1.58 35.0 1,579 9 44 3 1,669 28 Plsm 2 NZ_OU701460.1 OU701460.1 0.07 30.6 100 - - - 100 - Dendrogram (based on genomic BLAST)