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    LOC105094886 pepsin A-like [ Camelus dromedarius (Arabian camel) ]

    Gene ID: 105094886, updated on 19-Apr-2024

    Summary

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    Gene symbol
    LOC105094886
    Gene description
    pepsin A-like
    Locus tag
    Cadr_000014376
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Camelus dromedarius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
    Also known as
    pepsin
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 12 NC_087447.1 (9738804..9749822, complement)
    101 previous assembly CamDro3 (GCF_000803125.2) 10 NC_044520.1 (4618650..4629667, complement)

    Chromosome 12 - NC_087447.1Genomic Context describing neighboring genes Neighboring gene damage specific DNA binding protein 1 Neighboring gene von Willebrand factor C and EGF domains Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene pregnancy-associated glycoprotein Neighboring gene VPS37C subunit of ESCRT-I

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of recombinant camel chymosin reveals superior properties for the coagulation of bovine and camel milk. Kappeler SR, et al. Biochem Biophys Res Commun, 2006 Apr 7. PMID 16488399

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables aspartic-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pepsin A-like
    Names
    pepsin A
    NP_001290505.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001303576.1 → NP_001290505.1  pepsin A-like precursor

      See identical proteins and their annotated locations for NP_001290505.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ131678
      UniProtKB/TrEMBL
      Q9GK10
      Conserved Domains (3) summary
      cd05478
      Location:67 → 385
      pepsin_A; Pepsin A, aspartic protease produced in gastric mucosa of mammals
      pfam00026
      Location:76 → 387
      Asp; Eukaryotic aspartyl protease
      pfam07966
      Location:18 → 45
      A1_Propeptide; A1 Propeptide

    RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCamDro1.pat

    Genomic

    1. NC_087447.1 Reference mCamDro1.pat

      Range
      9738804..9749822 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases