U.S. flag

An official website of the United States government

  • Create RSS
  • Save search
  • Advanced
  • Help
Format

Send to:

Choose Destination
    • Showing Current items.

    LOC112266455 glucagon-1 [ Oncorhynchus tshawytscha (Chinook salmon) ]

    Gene ID: 112266455, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC112266455
    Gene description
    glucagon-1
    See related
    EnsemblRapid:ENSOTSG00005011551
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus tshawytscha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
    Also known as
    glucagon
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: LG14
    Exon count:
    6
    Annotation release Status Assembly LG Location
    101 current Otsh_v2.0 (GCF_018296145.1) LG14 NC_056442.1 (6872577..6876075)
    100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 14 NC_037110.1 (5601006..5604422)

    Linkage Group LG14 - NC_056442.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily H member 7 Neighboring gene grancalcin Neighboring gene dipeptidyl peptidase 4-like Neighboring gene adenylate cyclase type 10-like Neighboring gene sodium-driven chloride bicarbonate exchanger-like Neighboring gene T-box brain protein 1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Trout and chicken proglucagon: alternative splicing generates mRNA transcripts encoding glucagon-like peptide 2. Irwin DM, et al. Mol Endocrinol, 1995 Mar. PMID 7776976

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glucagon receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    glucagon-1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Otsh_v2.0 Primary Assembly

    Genomic

    1. NC_056442.1 Reference Otsh_v2.0 Primary Assembly

      Range
      6872577..6876075
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024443928.2 → XP_024299696.1  glucagon-1

      UniProtKB/TrEMBL
      A0A8C8CTV5, A0A8C8ET35
      Related
      ENSOTSP00005024455.1, ENSOTST00005026447.2
      Conserved Domains (2) summary
      smart00070
      Location:90 → 116
      GLUCA; Glucagon like hormones
      pfam00123
      Location:52 → 79
      Hormone_2; Peptide hormone
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases