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    MAMLD1 mastermind like domain containing 1 [ Equus caballus (horse) ]

    Gene ID: 100069293, updated on 8-Mar-2024

    Summary

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    Official Symbol
    MAMLD1provided by VGNC
    Official Full Name
    mastermind like domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:58998
    See related
    Ensembl:ENSECAG00000015482
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Also known as
    f18
    Orthologs
    human mouse all
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    Genomic context

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    See MAMLD1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) X NC_009175.3 (123396878..123521456)
    102 previous assembly EquCab2.0 (GCF_000002305.2) X NC_009175.2 (119425355..119485678)

    Chromosome X - NC_009175.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106781395 Neighboring gene uncharacterized LOC102150250 Neighboring gene microRNA mir-2114 Neighboring gene myotubularin 1 Neighboring gene myotubularin related protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cytogenetic and genetic studies in a hypospadic horse (Equus caballus, 2n = 64). De Lorenzi L, et al. Sex Dev, 2010. PMID 20733278
    2. Cloning and characterization of the equine F18 gene, which has a novel exon. Tozaki T, et al. Anim Genet, 1998 Oct. PMID 9800327
    3. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mastermind-like domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001173458.1 → NP_001166929.1  mastermind-like domain-containing protein 1

      See identical proteins and their annotated locations for NP_001166929.1

      Status: PROVISIONAL

      Source sequence(s)
      GQ869480
      UniProtKB/TrEMBL
      D3W8N3
      Related
      ENSECAP00000029696.2, ENSECAT00000050937.3
      Conserved Domains (1) summary
      PHA03247
      Location:299 → 573
      PHA03247; large tegument protein UL36; Provisional

    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009175.3 Reference EquCab3.0 Primary Assembly

      Range
      123396878..123521456
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005614568.3 → XP_005614625.2  mastermind-like domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2H913
      Conserved Domains (1) summary
      cl26464
      Location:299 → 573
      Atrophin-1; Atrophin-1 family

    2. XM_005614569.3 → XP_005614626.2  mastermind-like domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      cl26464
      Location:299 → 658
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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