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    LOC409098 histone-lysine N-methyltransferase eggless [ Apis mellifera (honey bee) ]

    Gene ID: 409098, updated on 25-Jan-2024

    Summary

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    Gene symbol
    LOC409098
    Gene description
    histone-lysine N-methyltransferase eggless
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    egg; GB53606
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    Genomic context

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    See LOC409098 in Genome Data Viewer
    Location:
    chromosome: LG12
    Exon count:
    14
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG12 NC_037649.1 (3920443..3925862, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG12 NC_007081.3 (3938377..3943786, complement)

    Linkage Group LG12 - NC_037649.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC411622 Neighboring gene uncharacterized LOC107965384 Neighboring gene myotrophin Neighboring gene serine/threonine-protein kinase SIK3-like Neighboring gene uncharacterized LOC113219147 Neighboring gene zinc transporter ZIP9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H3K9 methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heterochromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA methylation-dependent heterochromatin formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-lysine N-methyltransferase eggless
    Names
    eggless

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037649.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      3920443..3925862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_392624.7 → XP_392624.5  histone-lysine N-methyltransferase eggless

      UniProtKB/TrEMBL
      A0A7M7R6M8, A0A8B9B4A4
      Conserved Domains (3) summary
      smart00317
      Location:1037 → 1097
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
      cd01395
      Location:618 → 675
      HMT_MBD; Methyl-CpG binding domains (MBD) present in putative histone methyltransferases (HMT) such as CLLD8 and SETDB1 proteins; CLLD8 contains a MBD, a PreSET and a bifurcated SET domain, suggesting that CLLD8 might be associated with methylation-mediated ...
      pfam05033
      Location:697 → 809
      Pre-SET; Pre-SET motif
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials