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    calyx Calyx [ Hyphantria cunea nucleopolyhedrovirus ]

    Gene ID: 3890588, updated on 31-May-2023

    Summary

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    Gene symbol
    calyx
    Gene description
    Calyx
    Locus tag
    HynVgp025
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Hyphantria cunea nucleopolyhedrovirus
    Lineage
    Viruses; dsDNA viruses, no RNA stage; Baculoviridae; Alphabaculovirus
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    Genomic context

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    Sequence:
    NC_007767.1 (25568..26458, complement)

    NC_007767.1Genomic Context describing neighboring genes Neighboring gene Alkaline exonuclease Neighboring gene ORF24 peptide Neighboring gene GP16 Neighboring gene P24 capsid

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007767.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene organization and complete sequence of the Hyphantria cunea nucleopolyhedrovirus genome. Ikeda M, et al. J Gen Virol, 2006 Sep. PMID 16894193
    2. Identification and functional analysis of Hyphantria cunea nucleopolyhedrovirus iap genes. Ikeda M, et al. Virology, 2004 Apr 10. PMID 15051395
    3. Identification and characterization of Hyphantria cunea nucleopolyhedrovirus homologous repeated regions. Alves CA, et al. Virus Genes, 2002 Dec. PMID 12881639

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    Calyx
    YP_473213.1
    • orf25 calyx

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007767.1 Reference assembly

      Range
      25568..26458 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_473213.1 Calyx [Hyphantria cunea nucleopolyhedrovirus]

      See identical proteins and their annotated locations for YP_473213.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q2NNW4
      Conserved Domains (2) summary
      pfam04512
      Location:18 → 104
      Baculo_PEP_N; Baculovirus polyhedron envelope protein, PEP, N terminus
      pfam04513
      Location:148 → 286
      Baculo_PEP_C; Baculovirus polyhedron envelope protein, PEP, C terminus
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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