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    LOC106121483 cysteine sulfinic acid decarboxylase [ Papilio xuthus (Asian swallowtail) ]

    Gene ID: 106121483, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC106121483
    Gene description
    cysteine sulfinic acid decarboxylase
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Papilio xuthus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Papilionidae; Papilioninae; Papilio
    Also known as
    black
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current Pxut_1.0 (GCF_000836235.1) Unplaced Scaffold NW_013531704.1 (2718379..2725668, complement)

    NW_013531704.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(IX) chain-like Neighboring gene cytochrome P450 6B2-like Neighboring gene multiple C2 and transmembrane domain-containing protein 1-like Neighboring gene serine/threonine-protein kinase RIO1 Neighboring gene ATP-binding cassette sub-family G member 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_013531704.1 Unplaced Scaffold Reference Pxut_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Caterpillar color patterns are determined by a two-phase melanin gene prepatterning process: new evidence from tan and laccase2. Futahashi R, et al. Evol Dev, 2010 Mar-Apr. PMID 20433456

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carboxy-lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carboxylic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine sulfinic acid decarboxylase
    XP_013172625.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001311839.1 → NP_001298768.1  cysteine sulfinic acid decarboxylase

      Status: PROVISIONAL

      Source sequence(s)
      AB503723
      UniProtKB/TrEMBL
      A0A194PEG0, D4AH66
      Conserved Domains (1) summary
      cd06450
      Location:100 → 502
      DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

    RefSeqs of Annotated Genomes: Papilio xuthus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Pxut_1.0

    Genomic

    1. NW_013531704.1 Reference Pxut_1.0

      Range
      2718379..2725668 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013317171.1 → XP_013172625.1  cysteine sulfinic acid decarboxylase

      Conserved Domains (1) summary
      cd06450
      Location:100 → 502
      DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases