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    white protein white [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100499163, updated on 14-Dec-2023

    Summary

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    Gene symbol
    white
    Gene description
    protein white
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See white in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 5 Unlocalized Scaffold NW_022279659.1 (23030..438010, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 5 Unlocalized Scaffold NW_022279659.1 (23030..438010, complement)

    NW_022279659.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116417947 Neighboring gene uncharacterized LOC116417946 Neighboring gene uncharacterized LOC116417950 Neighboring gene uncharacterized LOC116417942 Neighboring gene uncharacterized LOC103317349 Neighboring gene uncharacterized LOC103317525 Neighboring gene uncharacterized LOC103317524 Neighboring gene uncharacterized LOC116417943 Neighboring gene uncharacterized LOC116417945 Neighboring gene uncharacterized LOC103316323 Neighboring gene uncharacterized LOC116417944 Neighboring gene uncharacterized LOC107981999 Neighboring gene intracellular protein transport protein USO1-like Neighboring gene uncharacterized LOC116417952

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein white

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191034.1 → NP_001177963.1  protein white

      Status: PROVISIONAL

      Source sequence(s)
      AAZX01004125, GE383445, GE383535, GE441513, GE443415
      UniProtKB/TrEMBL
      A0A7M6UH29
      Conserved Domains (3) summary
      cd03213
      Location:68 → 312
      ABCG_EPDR; Eye pigment and drug resistance transporter subfamily G of the ATP-binding cassette superfamily
      TIGR00955
      Location:69 → 680
      3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
      pfam01061
      Location:411 → 615
      ABC2_membrane; ABC-2 type transporter

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NW_022279659.1 Reference Nvit_psr_1.1

      Range
      23030..438010 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials