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    tin tinman [ Drosophila montana ]

    Gene ID: 135436883, updated on 10-May-2024

    Summary

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    Gene symbol
    tin
    Gene description
    tinman
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila montana
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Orthologs
    fruit fly all
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    Genomic context

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    See tin in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_04 current ASM3504440v1 (GCF_035044405.1) Unplaced Scaffold NW_026998620.1 (836314..841044, complement)

    NW_026998620.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase family 49 member B2 Neighboring gene bagpipe Neighboring gene modifier of mdg4 Neighboring gene pre-mod(mdg4)-U Neighboring gene pre-mod(mdg4)-V Neighboring gene pre-mod(mdg4)-W

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026998620 Unplaced Scaffold Reference ASM3504440v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    muscle-specific homeobox protein tinman

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_035044405.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3504440v1

    Genomic

    1. NW_026998620.1 Reference ASM3504440v1

      Range
      836314..841044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064694651.1 → XP_064550721.1  muscle-specific homeobox protein tinman

    Nucleotide Protein
    Heading Accession and Version