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    Shark SH2 ankyrin repeat kinase [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 657609, updated on 10-May-2024

    Summary

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    Gene symbol
    Shark
    Gene description
    SH2 ankyrin repeat kinase
    Locus tag
    TcasGA2_TC004153
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    fruit fly all
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    Genomic context

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    See Shark in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 10 NC_087403.1 (2334321..2337673)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LGX NC_007416.3 (1738978..1742381)

    Chromosome 10 - NC_087403.1Genomic Context describing neighboring genes Neighboring gene HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 Neighboring gene Lipoyltransferase 1 Neighboring gene leucine-rich repeat neuronal protein 1 Neighboring gene Kv channel-interacting protein 4 Neighboring gene uncharacterized LOC135265230 Neighboring gene uncharacterized LOC107397473

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine-protein kinase Shark
    Names
    AUGUSTUS-3.0.2_04153
    GLEAN_04153
    Tyrosine-protein kinase shark-like Protein
    tyrosine-protein kinase shark

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087403.1 Reference icTriCast1.1 Primary Assembly

      Range
      2334321..2337673
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_964060.5 → XP_969153.1  tyrosine-protein kinase Shark

      See identical proteins and their annotated locations for XP_969153.1

      UniProtKB/TrEMBL
      D6W6Q4
      Conserved Domains (7) summary
      smart00221
      Location:450 → 706
      STYKc; Protein kinase; unclassified specificity
      cd00204
      Location:146 → 271
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:156 → 249
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:118 → 171
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:150 → 181
      ANK; ANK repeat [structural motif]
      cl15255
      Location:9 → 87
      SH2; Src homology 2 (SH2) domain
      cl21453
      Location:456 → 711
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein Strain
    Heading Accession and Version

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