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    pinE site-specific DNA recombinase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945721, updated on 19-Sep-2024

    Summary

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    Official Symbol
    pinE
    Official Full Name
    site-specific DNA recombinase
    Primary source
    ECOCYC:EG10737
    Locus tag
    b1158
    See related
    ASAP:ABE-0003888
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1144; pin
    Summary
    Pin is a site-specific DNA recombinase that is a part of the e14 prophage element. [More information is available at EcoCyc: EG10737].
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    Genomic context

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    Sequence:
    NC_000913.3 (1209685..1210239)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative tail fiber assembly protein TfaP Neighboring gene putative tail fiber assembly protein TfaE Neighboring gene pseudo Neighboring gene Type IV methyl-directed restriction enzyme EcoKMcrA Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping of the pin locus coding for a site-specific recombinase that causes flagellar-phase variation in Escherichia coli K-12. Enomoto M, et al. J Bacteriol, 1983 Nov. PMID 6355064, Free PMC Article
    2. DNA inversions in the chromosome of Escherichia coli and in bacteriophage Mu: relationship to other site-specific recombination systems. Plasterk RH, et al. Proc Natl Acad Sci U S A, 1983 Sep. PMID 6310572, Free PMC Article
    3. A Mu gin complementing function and an invertible DNA region in Escherichia coli K-12 are situated on the genetic element e14. van de Putte P, et al. J Bacteriol, 1984 May. PMID 6233259, Free PMC Article
    4. A gene for DNA invertase and an invertible DNA in Escherichia coli K-12. Kutsukake K, et al. Gene, 1985. PMID 3891522
    5. Identification of a novel genetic element in Escherichia coli K-12. Greener A, et al. J Bacteriol, 1980 Oct. PMID 6998954, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA strand exchange activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA strand exchange activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA strand exchange activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA integration IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in DNA recombination IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in DNA recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within DNA recombination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    site-specific DNA recombinase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1209685..1210239
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415676.1 site-specific DNA recombinase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415676.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5YPR9
      Conserved Domains (2) summary
      cd03768
      Location:2 → 126
      SR_ResInv; Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and ...
      pfam02796
      Location:138 → 182
      HTH_7; Helix-turn-helix domain of resolvase
    Nucleotide Protein
    Heading Accession and Version

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