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    CCDC155 coiled-coil domain containing 155 [ Thamnophis elegans (Western terrestrial garter snake) ]

    Gene ID: 116521599, updated on 18-Mar-2024

    Summary

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    Gene symbol
    CCDC155
    Gene description
    coiled-coil domain containing 155
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Thamnophis elegans
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC155 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current rThaEle1.pri (GCF_009769535.1) Z NC_045558.1 (117043629..117077925)

    Chromosome Z - NC_045558.1Genomic Context describing neighboring genes Neighboring gene TEA domain transcription factor 2 Neighboring gene dickkopf like acrosomal protein 1 Neighboring gene GTPase HRas-like Neighboring gene fms related receptor tyrosine kinase 3 ligand

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045558.1 Chromosome Z Reference rThaEle1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromosome localization to nuclear envelope involved in homologous chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homologous chromosome pairing at meiosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spindle localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomere localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome, telomeric region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lateral element IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of meiotic nuclear membrane microtubule tethering complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in meiotic spindle pole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein KASH5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Thamnophis elegans Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rThaEle1.pri

    Genomic

    1. NC_045558.1 Reference rThaEle1.pri

      Range
      117043629..117077925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032236256.1 → XP_032092147.1  protein KASH5

      Conserved Domains (2) summary
      pfam14658
      Location:53 → 118
      EF-hand_9; EF-hand domain
      pfam14662
      Location:126 → 319
      KASH_CCD; Coiled-coil region of CCDC155 or KASH
    Nucleotide Protein
    Heading Accession and Version

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