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    ATPase ATP synthase gamma subunit [ Emiliania huxleyi CCMP1516 ]

    Gene ID: 17255733, updated on 28-Dec-2023

    Summary

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    Gene symbol
    ATPase
    Gene description
    ATP synthase gamma subunit
    Locus tag
    EMIHUDRAFT_461699
    Gene type
    protein coding
    RNA name
    ATP synthase gamma subunit
    RefSeq status
    PROVISIONAL
    Organism
    Emiliania huxleyi CCMP1516 (strain: CCMP1516)
    Lineage
    Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_005196756.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene RNA methyltransferase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_005196756.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pan genome of the phytoplankton Emiliania underpins its global distribution. Read BA, et al. Nature, 2013 Jul 11. PMID 23760476
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton-transporting ATP synthase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton motive force-driven ATP synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast thylakoid membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proton-transporting ATP synthase complex, catalytic core F(1) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    ATP synthase gamma subunit
    XP_005761783.1
    • proteomics confirmation from lipid body, endomembrane fractions; possibly a contaminant; proteomics confirmation from lipid body, endomembrane fractions. possibly a contaminant

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_005196756.1 Reference assembly

      Range
      66684..68260 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005761726.1 → XP_005761783.1  ATP synthase gamma subunit [Emiliania huxleyi CCMP1516]

      See identical proteins and their annotated locations for XP_005761783.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      R1DKU4
      Conserved Domains (1) summary
      PRK05621
      Location:38 → 359
      PRK05621; F0F1 ATP synthase subunit gamma; Validated
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases