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GOLGA8N golgin A8 family member N [ Homo sapiens (human) ]

Gene ID: 643699, updated on 2-Nov-2024

Summary

Official Symbol
GOLGA8Nprovided by HGNC
Official Full Name
golgin A8 family member Nprovided by HGNC
Primary source
HGNC:HGNC:44405
See related
Ensembl:ENSG00000232653 AllianceGenome:HGNC:44405
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GOLGA8R
Summary
Predicted to be involved in Golgi organization. Predicted to be located in Golgi apparatus. Predicted to be active in Golgi cis cisterna; Golgi cisterna membrane; and cis-Golgi network. [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Note: In Annotation Release 105, it was noticed GOLGA8R and GOLGA8N were placed at the 'wrong' locations, though they were placed at the correct locations in earlier releases. The error was fixed in December 2013 by renaming GeneID: 643699 as GOLGA8N and GeneID: 101059918 as GOLGA8R. [17 Jun 2014]
Expression
Broad expression in thyroid (RPKM 28.7), testis (RPKM 14.3) and 24 other tissues See more
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Genomic context

See GOLGA8N in Genome Data Viewer
Location:
15q13.3
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (32593456..32607237)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (30389925..30403712)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (32885657..32899438)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene WHAMM pseudogene 1 Neighboring gene long intergenic non-protein coding RNA 2256 Neighboring gene ARHGAP11A divergent transcript Neighboring gene 15q13 distal microdeletion recombination region Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32892481-32893030 Neighboring gene RNA, 7SL, cytoplasmic 286, pseudogene Neighboring gene ARHGAP11A-SCG5 readthrough Neighboring gene Rho GTPase activating protein 11A Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:32933404-32934044 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:32934045-32934683 Neighboring gene secretogranin V Neighboring gene uncharacterized LOC124903458 Neighboring gene SCG5 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in Golgi cis cisterna IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in Golgi cisterna membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cis-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
golgin subfamily A member 8N

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001282494.2NP_001269423.1  golgin subfamily A member 8N

    See identical proteins and their annotated locations for NP_001269423.1

    Status: VALIDATED

    Source sequence(s)
    AC123768
    Consensus CDS
    CCDS61578.1
    UniProtKB/Swiss-Prot
    F8WBI6
    UniProtKB/TrEMBL
    A0A0J9YX86
    Related
    ENSP00000398454.2, ENST00000448387.7
    Conserved Domains (1) summary
    pfam15070
    Location:226622
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    32593456..32607237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_011332701.1 Reference GRCh38.p14 PATCHES

    Range
    4645589..4659366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_012132920.1 Reference GRCh38.p14 PATCHES

    Range
    2111786..2125585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187660.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    4808041..4821818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    30389925..30403712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)