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    C8orf34-AS1 C8orf34 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 286189, updated on 17-Sep-2024

    Summary

    Official Symbol
    C8orf34-AS1provided by HGNC
    Official Full Name
    C8orf34 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:27840
    See related
    Ensembl:ENSG00000248801 AllianceGenome:HGNC:27840
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in lung (RPKM 2.8), prostate (RPKM 1.2) and 3 other tissues See more
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    Genomic context

    See C8orf34-AS1 in Genome Data Viewer
    Location:
    8q13.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (68303468..68331491, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (68730163..68758191, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (69215703..69243726, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 Neighboring gene uncharacterized LOC124901957 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:69114328-69114936 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:69141606-69142185 Neighboring gene MPRA-validated peak7062 silencer Neighboring gene MPRA-validated peak7063 silencer Neighboring gene ribosomal protein L31 pseudogene 40 Neighboring gene chromosome 8 open reading frame 34 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:69372559-69373058 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:69422928-69424127 Neighboring gene ret finger protein like 4A pseudogene 2 Neighboring gene ribosomal protein S15a pseudogene 25

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038877.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC041480
      Related
      ENST00000512294.7

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      68303468..68331491 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      68730163..68758191 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)