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    B3GNTL1P2 B3GNTL1 pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 106480419, updated on 17-Jun-2024

    Summary

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    Official Symbol
    B3GNTL1P2provided by HGNC
    Official Full Name
    B3GNTL1 pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:51318
    See related
    Ensembl:ENSG00000271328 AllianceGenome:HGNC:51318
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See B3GNTL1P2 in Genome Data Viewer
    Location:
    6p12.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (47368943..47369230)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (47206083..47206370)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (47336679..47336966)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375081 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24655 Neighboring gene MPRA-validated peak5831 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24657 Neighboring gene TNF receptor superfamily member 21 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:47252971-47254170 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24658 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:47276592-47277314 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24659 Neighboring gene Sharpr-MPRA regulatory region 4111 Neighboring gene NANOG hESC enhancer GRCh37_chr6:47306925-47307426 Neighboring gene uncharacterized LOC105375082 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24660 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24661 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24662 Neighboring gene CRISPRi-validated cis-regulatory element chr6.3292 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:47411751-47412484 Neighboring gene Sharpr-MPRA regulatory region 15024 Neighboring gene MPRA-validated peak5833 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17275 Neighboring gene CD2AP divergent transcript Neighboring gene CD2 associated protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    Other Names

    • UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 pseudogene 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_043195.1 

      Range
      101..388
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      47368943..47369230
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      47206083..47206370
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases