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    TRP-AGG2-5 tRNA-Pro (anticodon AGG) 2-5 [ Homo sapiens (human) ]

    Gene ID: 7217, updated on 17-Sep-2024

    Summary

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    Official Symbol
    TRP-AGG2-5provided by HGNC
    Official Full Name
    tRNA-Pro (anticodon AGG) 2-5provided by HGNC
    Primary source
    HGNC:HGNC:12330
    See related
    MIM:189930; AllianceGenome:HGNC:12330
    Gene type
    tRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TRP1; TRNP1; TRNAP1; TRP-AGG2-3
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    Genomic context

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    See TRP-AGG2-5 in Genome Data Viewer
    Location:
    14q11.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (20609336..20609407, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (14806450..14806521, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (21077495..21077566, complement)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:21027647-21028226 Neighboring gene ribonuclease A family member 9 (inactive) Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:21046340-21047110 Neighboring gene ribonuclease A family member 11 (inactive) Neighboring gene RNASE11 and RNASE12 antisense RNA 1 Neighboring gene ribonuclease A family member 12 (inactive) Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5567 Neighboring gene uncharacterized LOC124903280 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5568 Neighboring gene tRNA-Leu (anticodon AAG) 2-3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8081 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5569 Neighboring gene tRNA-Pro (anticodon AGG) 2-6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mitochondrial DNA polymorphisms in bipolar disorder. Kato T, et al. J Affect Disord, 2001 Feb. PMID 11223103
    2. Seven unidentified reading frames of human mitochondrial DNA encode subunits of the respiratory chain NADH dehydrogenase. Attardi G, et al. Cold Spring Harb Symp Quant Biol, 1986. PMID 3472707
    3. Differentiation of HT-29 human colonic adenocarcinoma cells correlates with increased expression of mitochondrial RNA: effects of trehalose on cell growth and maturation. Lu X, et al. Cancer Res, 1992 Jul 1. PMID 1377597
    4. Dinucleotide repeat in the human mitochondrial D-loop. Bodenteich A, et al. Hum Mol Genet, 1992 May. PMID 1301157
    5. Nucleotide sequence and transcription of a human tRNA gene cluster with four genes. Chang YN, et al. Gene, 1986. PMID 3557125

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Observational study of gene-disease association. (HuGE Navigator)
      Title: Mitochondrial DNA polymorphisms in bipolar disorder.
    Submit: New GeneRIF Correction

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • tRNA proline 1 (anticodon AGG)
    • tRNA-Pro-AGG-2-3
    • tRNA-Pro-AGG-2-5
    • transfer RNA proline 1 (anticodon AGG)
    • transfer RNA-Pro (AGG) 2-3
    • transfer RNA-Pro (AGG) 2-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      20609336..20609407 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      14806450..14806521 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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