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    rpsQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947808, updated on 24-Aug-2024

    Summary

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    Official Symbol
    rpsQ
    Primary source
    ASAP:ABE-0010840
    Locus tag
    b3311
    See related
    ECOCYC:EG10916
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3298; neaA
    Summary
    rpsQ can be deleted, but null mutants grow slowly and express kanamycin resistance weakly (Bubunenko, 2007), which may explain why a deletion was not isolated by Baba (2006), leading to its misclassification as an essential gene. [More information is available at EcoGene: EG10916]. The S17 protein is a component of the 30S subunit of the ribosome. [More information is available at EcoCyc: EG10916].
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    Genomic context

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    Sequence:
    NC_000913.3 (3448314..3448568, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 50S ribosomal subunit protein L24 Neighboring gene 50S ribosomal subunit protein L14 Neighboring gene 50S ribosomal subunit protein L29 Neighboring gene 50S ribosomal subunit protein L16 Neighboring gene 30S ribosomal subunit protein S3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Optical characteristics of all individual proteins from the small subunit of Escherichia coli ribosomes. Venyaminov SY, et al. Eur J Biochem, 1982 Aug. PMID 6751823
    2. Distance measurement by energy transfer: the 3' end of 16-S RNA and proteins S4 and S17 of the ribosome of Escherichia coli. Epe B, et al. Eur J Biochem, 1982 Dec. PMID 6186486
    3. Mapping of neamine resistance: identification to two genetic loci, nea A and nea B. Cannon M, et al. Mol Gen Genet, 1974 Jun 27. PMID 4604727
    4. Alteration of ribosomal protein S17 by mutation linked to neamine resistance in Escherichia coli. I. General properties of neaA mutants. Bollen A, et al. J Mol Biol, 1975 Dec 25. PMID 765484
    5. The primary structure of protein S17 from the small ribosomal subunit of Escherichia coli. Yaguchi M, et al. FEBS Lett, 1978 Mar 1. PMID 344065

    See all (44) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on mature peptide
      Title: A method for the chemical generation of N-terminal peptide sequence tags for rapid protein identification.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables molecular adaptor activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables rRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables small ribosomal subunit rRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in response to antibiotic IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to antibiotic IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in ribosomal small subunit assembly IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic small ribosomal subunit IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    30S ribosomal subunit protein S17

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3448314..3448568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417770.1 30S ribosomal subunit protein S17 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417770.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0FKC0
      Conserved Domains (1) summary
      PRK05610
      Location:1 → 83
      rpsQ; 30S ribosomal protein S17; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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