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    ydiO putative acyl-CoA dehydrogenase YdiO [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945626, updated on 10-Oct-2024

    Summary

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    Official Symbol
    ydiO
    Official Full Name
    putative acyl-CoA dehydrogenase YdiO
    Primary source
    ECOCYC:G6918
    Locus tag
    b1695
    See related
    ASAP:ABE-0005658
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1693
    Summary
    YdiO is predicted to be an acyl-CoA dehydrogenase . [More information is available at EcoCyc: G6918].
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    Genomic context

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    Sequence:
    NC_000913.3 (1777196..1778347)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 3-dehydroquinate dehydratase Neighboring gene putative acetate-CoA transferase YdiF Neighboring gene putative DNA-binding transcriptional regulator YdiP Neighboring gene putative electron transfer flavoprotein subunit YdiQ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. [Escherichia coli ydiO and ydiQRST genes encode components of acyl-CoA dehydrogenase complex of anaerobic fatty acid β-oxidation pathway]. Gulevich AY, et al. Genetika, 2016 Oct. PMID 29369593
    2. Engineered reversal of the β-oxidation cycle for the synthesis of fuels and chemicals. Dellomonaco C, et al. Nature, 2011 Aug 10. PMID 21832992
    3. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). Reed JL, et al. Genome Biol, 2003. PMID 12952533, Free PMC Article
    4. A new Escherichia coli metabolic competency: growth on fatty acids by a novel anaerobic beta-oxidation pathway. Campbell JW, et al. Mol Microbiol, 2003 Feb. PMID 12535077
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Escherichia coli ydiO and ydiQRST genes encode components of acyl-CoA dehydrogenase complex of anaerobic fatty acid beta-oxidation pathway.
      Title: [Escherichia coli ydiO and ydiQRST genes encode components of acyl-CoA dehydrogenase complex of anaerobic fatty acid β-oxidation pathway].
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables acyl-CoA dehydrogenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables acyl-CoA dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in 1-butanol biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    putative acyl-CoA dehydrogenase YdiO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1777196..1778347
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416210.4 putative acyl-CoA dehydrogenase YdiO [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416210.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376JZW3, A0A454A4E5, A0A478KZ60, A0A6N8QS74, A0AAN3LRC4, A0AAN3ME36, B1LE41, E1JFV8, W1ETG2
      Conserved Domains (1) summary
      PRK12341
      Location:1 → 381
      PRK12341; acyl-CoA dehydrogenase
    Nucleotide Protein
    Heading Accession and Version

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