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    dpb3 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 9406966, updated on 22-Aug-2024

    Summary

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    Official Symbol
    dpb3
    Primary source
    PomBase:SPCC16C4.22
    Locus tag
    SPOM_SPCC16C4.22
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003421.2 (684677..685496)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Dis3L2-like 3'-5'-exoribonuclease Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene 6-phosphogluconolactonase Neighboring gene cyclin-dependent protein kinase Pho85/PhoA-like Pef1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Coordinated regulation of heterochromatin inheritance by Dpb3-Dpb4 complex. He H, et al. Proc Natl Acad Sci U S A, 2017 Nov 21. PMID 29109278, Free PMC Article
    2. DNA polymerization-independent functions of DNA polymerase epsilon in assembly and progression of the replisome in fission yeast. Handa T, et al. Mol Biol Cell, 2012 Aug. PMID 22718908, Free PMC Article
    3. Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex. Egan ED, et al. RNA, 2014 Jun. PMID 24713849, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    contributes_to DNA polymerase processivity factor activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables nucleosome binding EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in CMG complex assembly IC
    Inferred by Curator
    more info
    		  
    involved_in DNA replication-dependent chromatin assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in DNA strand elongation involved in mitotic DNA replication IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in DNA-templated DNA replication IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in heterochromatin formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mitotic DNA replication initiation IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of epsilon DNA polymerase complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    is_active_in nuclear replication fork IC
    Inferred by Curator
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    DNA polymerase epsilon Dpb3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      684677..685496
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001355889.2 → NP_001343092.1  DNA polymerase epsilon Dpb3 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      C6Y4D0
      Conserved Domains (1) summary
      cl28542
      Location:10 → 86
      BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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