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    RPC17 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853442, updated on 22-Aug-2024

    Summary

    Official Symbol
    RPC17
    Primary source
    FungiDB:YJL011C
    Locus tag
    YJL011C
    See related
    SGD:S000003548; AllianceGenome:SGD:S000003548; VEuPathDB:YJL011C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Contributes to RNA polymerase III activity. Involved in tRNA transcription by RNA polymerase III and transcription initiation from RNA polymerase III promoter. Located in cytosol and nucleus. Part of RNA polymerase III complex. Orthologous to human CRCP (CGRP receptor component). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    chromosome: X
    Exon count:
    1
    Sequence:
    Chromosome: X; NC_001142.9 (414285..414770, complement)

    Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene Mad3p Neighboring gene Vtc4p Neighboring gene tRNA-Lys Neighboring gene tRNA-Trp

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    contributes_to RNA polymerase III activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of DNA-directed RNA polymerase complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of RNA polymerase III complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of RNA polymerase III complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    DNA-directed RNA polymerase III subunit RPC17
    NP_012523.2
    • RNA polymerase III subunit C17; physically interacts with C31, C11, and TFIIIB70; may be involved in the recruitment of pol III by the preinitiation complex; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001142.9 Reference assembly

      Range
      414285..414770 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001181445.2NP_012523.2  TPA: DNA-directed RNA polymerase III subunit RPC17 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012523.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VWG6, P47076
      UniProtKB/TrEMBL
      A6ZPV8, B3LQ91, B5VLG1, C7GSP2, C8ZBK0, G2WH00, N1P8K7
      Conserved Domains (1) summary
      pfam03874
      Location:10160
      RNA_pol_Rpb4; RNA polymerase Rpb4