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    LAM5 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 850501, updated on 22-Aug-2024

    Summary

    Official Symbol
    LAM5
    Primary source
    FungiDB:YFL042C
    Locus tag
    YFL042C
    See related
    SGD:S000001852; AllianceGenome:SGD:S000001852; VEuPathDB:YFL042C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    LTC2; YFL043C
    Summary
    Predicted to enable sterol transfer activity. Predicted to be involved in intracellular sterol transport. Located in mitochondria-associated endoplasmic reticulum membrane and nucleus-vacuole junction. Orthologous to several human genes including GRAMD1A (GRAM domain containing 1A) and GRAMD1B (GRAM domain containing 1B). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See LAM5 in Genome Data Viewer
    Location:
    chromosome: VI
    Exon count:
    1
    Sequence:
    Chromosome: VI; NC_001138.5 (45720..47744, complement)

    Chromosome VI - NC_001138.5Genomic Context describing neighboring genes Neighboring gene phosphomannomutase SEC53 Neighboring gene ubiquitin-specific protease OTU1 Neighboring gene uncharacterized protein Neighboring gene ferroxidase FET5

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables sterol binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sterol transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sterol transfer activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in intracellular sterol transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intracellular sterol transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cortical endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in endoplasmic reticulum-plasma membrane contact site IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondria-associated endoplasmic reticulum membrane contact site IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus-vacuole junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in organelle IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Lam5p
    NP_116611.1
    • Putative sterol transfer protein; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; localizes to membrane contact sites throughout the cell, including nucleus-vacuole junctions and ER-mitochondrial contact sites

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001138.5 Reference assembly

      Range
      45720..47744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179924.1NP_116611.1  TPA: Lam5p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_116611.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VTI7, P43559, P43560
      UniProtKB/TrEMBL
      G2WD98, N1PA16
      Conserved Domains (2) summary
      cd13220
      Location:209302
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam16016
      Location:418562
      DUF4782; Domain of unknown function (DUF4782)