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    GA3OX4 gibberellin 3-oxidase 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844373, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GA3OX4
    Official Full Name
    gibberellin 3-oxidase 4
    Primary source
    TAIR:AT1G80330
    Locus tag
    AT1G80330
    See related
    Araport:AT1G80330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA GIBBERELLIN 3-OXIDASE 4; ATGA3OX4; F5I6.8; F5I6_8; gibberellin 3-oxidase 4
    Summary
    Encodes a protein with gibberellin 3-oxidase activity. The enzyme, expressed and purified in E.coli, was shown to catalyze the 3beta-hydroxylation of GA20 into GA29.
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    Genomic context

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    See GA3OX4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (30198061..30199537, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene sulfate transmembrane transporter Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene gibberellin 3-oxidase 2 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Purification and kinetic studies of recombinant gibberellin dioxygenases. Lester DR, et al. BMC Plant Biol, 2005 Sep 25. PMID 16181493, Free PMC Article
    2. Potential sites of bioactive gibberellin production during reproductive growth in Arabidopsis. Hu J, et al. Plant Cell, 2008 Feb. PMID 18310462, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_106682.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables gibberellin 3-beta-dioxygenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within gibberellin biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in gibberellin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    gibberellin 3-oxidase 4
    NP_178149.1
    • gibberellin 3-oxidase 4 (GA3OX4); CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: gibberellin 3-oxidase 1 (TAIR:AT1G15550.1); Has 8413 Blast hits to 8377 proteins in 994 species: Archae - 0; Bacteria - 1114; Metazoa - 109; Fungi - 995; Plants - 4899; Viruses - 0; Other Eukaryotes - 1296 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      30198061..30199537 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106682.1 → NP_178149.1  gibberellin 3-oxidase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178149.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q1KS84, Q9C971
      UniProtKB/TrEMBL
      A0A654EQT0, A0A7G2E4E5
      Conserved Domains (1) summary
      PLN02254
      Location:1 → 354
      PLN02254; gibberellin 3-beta-dioxygenase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C971.1

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