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    CML23 calmodulin like 23 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842958, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CML23
    Official Full Name
    calmodulin like 23
    Primary source
    TAIR:AT1G66400
    Locus tag
    AT1G66400
    See related
    Araport:AT1G66400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    calmodulin like 23; T27F4.15; T27F4_15
    Summary
    Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering.
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    Genomic context

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    See CML23 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (24770419..24771393, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myb domain protein 114 Neighboring gene myb domain protein 90 Neighboring gene calmodulin 4 Neighboring gene DNA-binding storekeeper protein-related transcriptional regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis potential calcium sensors regulate nitric oxide levels and the transition to flowering. Tsai YC, et al. Plant Signal Behav, 2007 Nov. PMID 19517005, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105311.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of flower development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of nitric oxide metabolic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    calmodulin like 23
    NP_564874.1
    • calmodulin like 23 (CML23); FUNCTIONS IN: calcium ion binding; INVOLVED IN: regulation of flower development, regulation of nitric oxide metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT5G37770.1); Has 30871 Blast hits to 18969 proteins in 1622 species: Archae - 1; Bacteria - 165; Metazoa - 12615; Fungi - 7465; Plants - 6190; Viruses - 4; Other Eukaryotes - 4431 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24770419..24771393 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105311.3 → NP_564874.1  calmodulin like 23 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564874.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8T8, Q9C8Y1
      UniProtKB/TrEMBL
      A0A178WD05, A0A654ERM5
      Conserved Domains (1) summary
      PTZ00184
      Location:13 → 152
      PTZ00184; calmodulin; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C8Y1.1

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