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    EXO70D2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841847, updated on 22-Aug-2024

    Summary

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    Official Symbol
    EXO70D2
    Primary source
    Araport:AT1G54090
    Locus tag
    AT1G54090
    See related
    TAIR:AT1G54090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATEXO70D2; exocyst subunit exo70 family protein D2; F15I1.17; F15I1_17
    Summary
    A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
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    Genomic context

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    See EXO70D2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (20189472..20191900)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Dormancy/auxin associated family protein Neighboring gene oligouridylate-binding protein 1A Neighboring gene DUF1677 family protein, putative (DUF1677) Neighboring gene aldehyde dehydrogenase 7B4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EXPO, an exocyst-positive organelle distinct from multivesicular endosomes and autophagosomes, mediates cytosol to cell wall exocytosis in Arabidopsis and tobacco cells. Wang J, et al. Plant Cell, 2010 Dec. PMID 21193573, Free PMC Article
    2. Characterization of the Arabidopsis thaliana exocyst complex gene families by phylogenetic, expression profiling, and subcellular localization studies. Chong YT, et al. New Phytol, 2010 Jan. PMID 19895414
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_104286.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exocyst subunit exo70 family protein D2
    NP_175811.1
    • exocyst subunit exo70 family protein D2 (EXO70D2); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: cytosol, nucleus, exocyst; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein D3 (TAIR:AT3G14090.1); Has 901 Blast hits to 890 proteins in 129 species: Archae - 2; Bacteria - 4; Metazoa - 138; Fungi - 84; Plants - 651; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20189472..20191900
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104286.3 → NP_175811.1  exocyst subunit exo70 family protein D2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175811.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKC9, A0A5S9WPU1, Q9SYG5
      Conserved Domains (1) summary
      pfam03081
      Location:239 → 607
      Exo70; Exo70 exocyst complex subunit
    Nucleotide Protein
    Heading Accession and Version

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