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    PKp3 plastidial pyruvate kinase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840138, updated on 18-Sep-2024

    Summary

    Official Symbol
    PKp3
    Official Full Name
    plastidial pyruvate kinase 3
    Primary source
    TAIR:AT1G32440
    Locus tag
    AT1G32440
    See related
    Araport:AT1G32440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5D14.22; F5D14_22; F5F19.10; F5F19_10; plastidial pyruvate kinase 3
    Summary
    encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.
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    Genomic context

    See PKp3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (11711944..11715162)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene nitrate transporter 1.5 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Single hybrid motif superfamily protein Neighboring gene isocitrate dehydrogenase IV

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    NM_102979.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables potassium ion binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables pyruvate kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within fatty acid biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in seed maturation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     
    located_in chloroplast stroma IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    plastidial pyruvate kinase 3
    NP_564402.1
    • plastidial pyruvate kinase 3 (PKp3); FUNCTIONS IN: pyruvate kinase activity; INVOLVED IN: glycolysis, fatty acid biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: plastidic pyruvate kinase beta subunit 1 (TAIR:AT5G52920.1); Has 10210 Blast hits to 10148 proteins in 2685 species: Archae - 173; Bacteria - 5966; Metazoa - 531; Fungi - 219; Plants - 532; Viruses - 0; Other Eukaryotes - 2789 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11711944..11715162
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102979.2NP_564402.1  plastidial pyruvate kinase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564402.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93Z53, Q9LQL3
      UniProtKB/TrEMBL
      A0A178W6P8, A0A5S9WI55
      Conserved Domains (1) summary
      PLN02623
      Location:3569
      PLN02623; pyruvate kinase