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    ENTH/VHS family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822316, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ENTH/VHS family protein
    Primary source
    TAIR:AT3G26990
    Locus tag
    AT3G26990
    See related
    Araport:AT3G26990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (9948125..9952055, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene ncRNA Neighboring gene membrane-anchored ubiquitin-fold protein 4 precursor Neighboring gene actin related protein 2 Neighboring gene TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001338847.1
    NM_113613.5

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ENTH/VHS family protein
    NP_189335.2
    • ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G65180.1); Has 1003 Blast hits to 995 proteins in 197 species: Archae - 0; Bacteria - 21; Metazoa - 515; Fungi - 219; Plants - 159; Viruses - 1; Other Eukaryotes - 88 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9948125..9952055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113613.5 → NP_189335.2  ENTH/VHS family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189335.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XG06, Q66GK1
      Conserved Domains (1) summary
      smart00582
      Location:10 → 130
      RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA

    2. NM_001338847.1 → NP_001325949.1  ENTH/VHS family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XG06, Q66GK1
    Nucleotide Protein
    Heading Accession and Version

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