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    TSO1 Tesmin/TSO1-like CXC domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821849, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TSO1
    Official Full Name
    Tesmin/TSO1-like CXC domain-containing protein
    Primary source
    TAIR:AT3G22780
    Locus tag
    AT3G22780
    See related
    Araport:AT3G22780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATTSO1; CHINESE FOR 'UGLY'
    Summary
    putative DNA binding protein (tso1) mRNA, tso1-3 allele
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    Genomic context

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    See TSO1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (8048802..8052504)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene Tesmin/TSO1-like CXC domain-containing protein Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene Kinase interacting (KIP1-like) family protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds zinc in vitro and TSO1 is required for both male and female fertility in Arabidopsis thaliana. Andersen SU, et al. J Exp Bot, 2007. PMID 18057042
    2. TSO1 is a novel protein that modulates cytokinesis and cell expansion in Arabidopsis. Hauser BA, et al. Development, 2000 May. PMID 10769245
    3. Regulation of meristem organization and cell division by TSO1, an Arabidopsis gene with cysteine-rich repeats. Song JY, et al. Development, 2000 May. PMID 10769244
    4. TSO1 functions in cell division during Arabidopsis flower development. Liu Z, et al. Development, 1997 Feb. PMID 9043081
    5. Recessive antimorphic alleles overcome functionally redundant loci to reveal TSO1 function in Arabidopsis flowers and meristems. Sijacic P, et al. PLoS Genet, 2011 Nov. PMID 22072982, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Cyclin A participates in the TSO1-MYB3R1 regulatory module to maintain shoot meristem size and fertility in Arabidopsis.
      Title: Cyclin A participates in the TSO1-MYB3R1 regulatory module to maintain shoot meristem size and fertility in Arabidopsis.
    2. the class I phenotype can be mimicked by knocking out both TSO1 and its homolog SOL2 in double mutants.
      Title: Recessive antimorphic alleles overcome functionally redundant loci to reveal TSO1 function in Arabidopsis flowers and meristems.
    3. The roles of TCX proteins in the observed range of phenotypes in tso1 mutants in A. thaliana are reported.
      Title: The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds zinc in vitro and TSO1 is required for both male and female fertility in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_113177.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within epidermal cell division IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in floral organ morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within guard mother cell cytokinesis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in regulation of cell division IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of meristem structural organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Tesmin/TSO1-like CXC domain-containing protein
    NP_566718.2
    • CHINESE FOR 'UGLY' (TSO1); CONTAINS InterPro DOMAIN/s: Tesmin/TSO1-like, CXC (InterPro:IPR005172); BEST Arabidopsis thaliana protein match is: TESMIN/TSO1-like CXC 2 (TAIR:AT4G14770.1); Has 1209 Blast hits to 687 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 404; Fungi - 6; Plants - 347; Viruses - 0; Other Eukaryotes - 452 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8048802..8052504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113177.4 → NP_566718.2  Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566718.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H1Q0, Q94AI2, Q9LE32, Q9LUI3
      UniProtKB/TrEMBL
      A0A178VBV1, A0A5S9XEP6, A0A654F9R9
      Conserved Domains (1) summary
      pfam03638
      Location:401 → 435
      TCR; Tesmin/TSO1-like CXC domain, cysteine-rich domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LUI3.1

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