U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Gag-Pol-related retrotransposon family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821649, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Gag-Pol-related retrotransposon family protein
    Primary source
    TAIR:AT3G20980
    Locus tag
    AT3G20980
    See related
    Araport:AT3G20980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (7355963..7357966)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene NFU domain protein 4 Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene low-molecular-weight cysteine-rich 56

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Gag-Pol-related retrotransposon family protein
    NP_188735.1
    • Gag-Pol-related retrotransposon family protein; BEST Arabidopsis thaliana protein match is: Gag-Pol-related retrotransposon family protein (TAIR:AT3G21000.1); Has 688 Blast hits to 571 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 27; Plants - 650; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7355963..7357966
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112991.1 → NP_188735.1  Gag-Pol-related retrotransposon family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188735.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V8Q7, F4IWC6
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools