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    RBL14 RHOMBOID-like protein 14 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821028, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RBL14
    Official Full Name
    RHOMBOID-like protein 14
    Primary source
    TAIR:AT3G17611
    Locus tag
    AT3G17611
    See related
    Araport:AT3G17611
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRBL10; ATRBL14; RBL10; RHOMBOID-like protein 10; RHOMBOID-like protein 14
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    Genomic context

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    See RBL14 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (6024795..6026556)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene indole-3-acetic acid inducible 31 Neighboring gene HY5-homolog Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene structural constituent of ribosome Neighboring gene ncRNA Neighboring gene cation/H+ exchanger 19 Neighboring gene Leucine-rich repeat (LRR) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A subcellular localization compendium of hydrogen peroxide-induced proteins. Inzé A, et al. Plant Cell Environ, 2012 Feb. PMID 21443605
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084701.1
    NM_180275.3
    NM_202600.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RHOMBOID-like protein 14
    NP_001078170.1
    • RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); Has 157 Blast hits to 157 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 77; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
    NP_850606.1
    • RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 15 (TAIR:AT3G58460.1); Has 871 Blast hits to 869 proteins in 317 species: Archae - 18; Bacteria - 429; Metazoa - 87; Fungi - 37; Plants - 177; Viruses - 3; Other Eukaryotes - 120 (source: NCBI BLink).
    NP_974329.1
    • RHOMBOID-like protein 14 (RBL14); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: RHOMBOID-like protein 15 (TAIR:AT3G58460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6024795..6026556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084701.1 → NP_001078170.1  RHOMBOID-like protein 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078170.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RXW0
      Conserved Domains (2) summary
      sd00029
      Location:116 → 135
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:113 → 137
      zf-RanBP; Zn-finger in Ran binding protein and others

    2. NM_180275.3 → NP_850606.1  RHOMBOID-like protein 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850606.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MS64, Q27GK6, Q682Z5, Q8RXW0
      UniProtKB/TrEMBL
      A0A178VF31, A0A5S9XD77
      Conserved Domains (3) summary
      sd00029
      Location:277 → 296
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:274 → 298
      zf-RanBP; Zn-finger in Ran binding protein and others
      cl21536
      Location:78 → 216
      Rhomboid; Rhomboid family

    3. NM_202600.1 → NP_974329.1  RHOMBOID-like protein 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974329.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RXW0
      Conserved Domains (3) summary
      sd00029
      Location:182 → 201
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:179 → 203
      zf-RanBP; Zn-finger in Ran binding protein and others
      cl21536
      Location:1 → 121
      Rhomboid; Rhomboid family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RXW0.1

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