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    CYP72A13 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820694, updated on 22-Aug-2024

    Summary

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    Official Symbol
    CYP72A13
    Primary source
    Araport:AT3G14660
    Locus tag
    AT3G14660
    See related
    TAIR:AT3G14660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 72; polypeptide 13; polypeptide 13''; subfamily A
    Summary
    putative cytochrome P450
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (4924777..4927607)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 72, subfamily A, polypeptide 10 Neighboring gene cytochrome P450, family 72, subfamily A, polypeptide 11 Neighboring gene uncharacterized protein Neighboring gene cytochrome P450, family 72, subfamily A, polypeptide 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001338130.1
    NM_112327.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450, family 72, subfamily A, polypeptide 13
    NP_188084.1
    • ''cytochrome P450, family 72, subfamily A, polypeptide 13'' (CYP72A13); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 31786 Blast hits to 31657 proteins in 1619 species: Archae - 67; Bacteria - 4951; Metazoa - 11303; Fungi - 6022; Plants - 7953; Viruses - 3; Other Eukaryotes - 1487 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4924777..4927607
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338129.1 → NP_001326384.1  cytochrome P450, family 72, subfamily A, polypeptide 13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LP42

    2. NM_112327.3 → NP_188084.1  cytochrome P450, family 72, subfamily A, polypeptide 13 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188084.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LUC8
      UniProtKB/TrEMBL
      A0A654F773
      Conserved Domains (1) summary
      cl12078
      Location:24 → 512
      p450; Cytochrome P450

    3. NM_001338130.1 → NP_001326383.1  cytochrome P450, family 72, subfamily A, polypeptide 13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LP41
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LUC8.1

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