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    CYP72A8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820690, updated on 22-Aug-2024

    Summary

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    Official Symbol
    CYP72A8
    Primary source
    Araport:AT3G14620
    Locus tag
    AT3G14620
    See related
    TAIR:AT3G14620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; family 72; polypeptide 8; polypeptide 8''; subfamily A
    Summary
    putative cytochrome P450
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (4914789..4917176)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L18ae/LX family protein Neighboring gene cytochrome P450, family 72, subfamily A, polypeptide 7 Neighboring gene cytochrome P450, family 72, subfamily A, polypeptide 9 Neighboring gene cytochrome P450, family 72, subfamily A, polypeptide 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis. Li G, et al. Nat Cell Biol, 2011 May. PMID 21499259
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_112323.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within circadian rhythm IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    cytochrome P450, family 72, subfamily A, polypeptide 8
    NP_188080.1
    • ''cytochrome P450, family 72, subfamily A, polypeptide 8'' (CYP72A8); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 7 (TAIR:AT3G14610.1); Has 32806 Blast hits to 32698 proteins in 1616 species: Archae - 69; Bacteria - 4592; Metazoa - 11483; Fungi - 6886; Plants - 8292; Viruses - 3; Other Eukaryotes - 1481 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4914789..4917176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112323.5 → NP_188080.1  cytochrome P450, family 72, subfamily A, polypeptide 8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188080.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V623, A0A5S9XC57, A0A654F779, Q8W1E1, Q9LUD2
      Conserved Domains (1) summary
      cl12078
      Location:26 → 515
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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