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    RLP30 receptor like protein 30 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819700, updated on 7-Sep-2023

    Summary

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    Gene symbol
    RLP30
    Gene description
    receptor like protein 30
    Primary source
    Araport:AT3G05360
    Locus tag
    AT3G05360
    See related
    TAIR:AT3G05360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP30; F22F7.23; receptor like protein 30
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    Genomic context

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    See RLP30 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (1530668..1533361, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene cyclin family Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Metallopeptidase M24 family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene receptor like protein 31

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Trichoderma asperelloides suppresses nitric oxide generation elicited by Fusarium oxysporum in Arabidopsis roots. Gupta KJ, et al. Mol Plant Microbe Interact, 2014 Apr. PMID 24283937
    2. Transcriptional regulation of receptor-like protein genes by environmental stresses and hormones and their overexpression activities in Arabidopsis thaliana. Wu J, et al. J Exp Bot, 2016 May. PMID 27099374, Free PMC Article
    3. Arabidopsis receptor-like protein30 and receptor-like kinase suppressor of BIR1-1/EVERSHED mediate innate immunity to necrotrophic fungi. Zhang W, et al. Plant Cell, 2013 Oct. PMID 24104566, Free PMC Article
    4. A genome-wide functional investigation into the roles of receptor-like proteins in Arabidopsis. Wang G, et al. Plant Physiol, 2008 Jun. PMID 18434605, Free PMC Article
    5. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. RLP30, BAK1, and SOBIR1/EVR contribute to resistance against necrotrophic fungi.
      Title: Arabidopsis receptor-like protein30 and receptor-like kinase suppressor of BIR1-1/EVERSHED mediate innate immunity to necrotrophic fungi.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_111409.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in detection of molecule of fungal origin IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to fungus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to mannitol IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to molecule of bacterial origin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to molecule of fungal origin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to molecule of oomycetes origin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 30
    NP_187187.1
    • receptor like protein 30 (RLP30); FUNCTIONS IN: kinase activity; INVOLVED IN: defense response signaling pathway, resistance gene-independent, signal transduction, response to cyclopentenone, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 11 (TAIR:AT1G71390.1); Has 101325 Blast hits to 29993 proteins in 1145 species: Archae - 37; Bacteria - 7130; Metazoa - 23873; Fungi - 1058; Plants - 61263; Viruses - 2; Other Eukaryotes - 7962 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1530668..1533361 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111409.3 → NP_187187.1  receptor like protein 30 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187187.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9MA83
      UniProtKB/TrEMBL
      A0A178VIG6
      Conserved Domains (5) summary
      cd00116
      Location:107 → 317
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:89 → 112
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:40 → 81
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam12066
      Location:758 → 786
      DUF3546; Domain of unknown function (DUF3546)
      pfam13855
      Location:135 → 195
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9MA83.1

    Gene LinkOut

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