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    CAM2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818710, updated on 22-Aug-2024

    Summary

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    Official Symbol
    CAM2
    Primary source
    Araport:AT2G41110
    Locus tag
    AT2G41110
    See related
    TAIR:AT2G41110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCAL5; calmodulin 2; CALMODULIN 2; T3K9.12; T3K9_12
    Summary
    Encodes a touch-inducible calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.
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    Genomic context

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    See CAM2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (17140183..17141431)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Calcium-binding EF-hand family protein Neighboring gene ncRNA Neighboring gene Calcium-binding EF hand family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene DUF309 domain protein Neighboring gene ncRNA Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A loss-of-function mutation in Calmodulin2 gene affects pollen germination in Arabidopsis thaliana. Landoni M, et al. Plant Mol Biol, 2010 Oct. PMID 20683641
    2. Arabidopsis ubiquitin-specific protease 6 (AtUBP6) interacts with calmodulin. Moon BC, et al. FEBS Lett, 2005 Jul 18. PMID 15987637
    3. Arabidopsis calmodulin-binding protein IQ67-domain 1 localizes to microtubules and interacts with kinesin light chain-related protein-1. Bürstenbinder K, et al. J Biol Chem, 2013 Jan 18. PMID 23204523, Free PMC Article
    4. Calcium/calmodulin-regulated receptor-like kinase CRLK1 interacts with MEKK1 in plants. Yang T, et al. Plant Signal Behav, 2010 Aug. PMID 20724845, Free PMC Article
    5. LIK1, a CERK1-interacting kinase, regulates plant immune responses in Arabidopsis. Le MH, et al. PLoS One, 2014. PMID 25036661, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001202795.1
    NM_180013.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within pollen germination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within protein catabolic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    calmodulin 2
    NP_001189724.1
    • calmodulin 2 (CAM2); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3).
    NP_850344.1
    • calmodulin 2 (CAM2); FUNCTIONS IN: protein binding, calcium ion binding; INVOLVED IN: pollen germination, protein catabolic process; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 34068 Blast hits to 23201 proteins in 1763 species: Archae - 4; Bacteria - 227; Metazoa - 14490; Fungi - 7344; Plants - 6998; Viruses - 0; Other Eukaryotes - 5005 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17140183..17141431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180013.3 → NP_850344.1  calmodulin 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850344.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P0DH97, P0DH98, P25069, Q682T9
      UniProtKB/TrEMBL
      A0A178VP83, A0A5S9X5Z7, A8Y7S8
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 149
      PTZ00184; calmodulin; Provisional

    2. NM_001202795.1 → NP_001189724.1  calmodulin 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189724.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8Y7S8, F4IJ46
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 161
      PTZ00184; calmodulin; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0DH97.1
    P0DH98.1
    Q682T9.1

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials