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    ATCOAE dephospho-CoA kinase family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817294, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATCOAE
    Official Full Name
    dephospho-CoA kinase family
    Primary source
    TAIR:AT2G27490
    Locus tag
    AT2G27490
    See related
    Araport:AT2G27490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10A12.17; F10A12_17
    Summary
    AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.
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    Genomic context

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    See ATCOAE in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (11748015..11750488, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene sec23/sec24 transport family protein Neighboring gene nuclear factor Y, subunit B11 Neighboring gene ncRNA Neighboring gene Calcium-binding EF-hand family protein Neighboring gene miscRNA Neighboring gene Glycosyl hydrolase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. 4'-phosphopantetheine and coenzyme A biosynthesis in plants. Kupke T, et al. J Biol Chem, 2003 Oct 3. PMID 12860978
    2. In-depth proteome analysis of Arabidopsis leaf peroxisomes combined with in vivo subcellular targeting verification indicates novel metabolic and regulatory functions of peroxisomes. Reumann S, et al. Plant Physiol, 2009 May. PMID 19329564, Free PMC Article
    3. Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Szponarski W, et al. Proteomics, 2004 Feb. PMID 14760709
    4. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001336118.1
    NM_001336119.1
    NM_128309.4
    NM_179771.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables dephospho-CoA kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within coenzyme A biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in coenzyme A biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in peroxisome HDA PubMed 
    located_in peroxisome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    dephospho-CoA kinase family
    NP_180318.1
    • ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink).
    NP_850102.1
    • ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11748015..11750488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128309.4 → NP_180318.1  dephospho-CoA kinase family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180318.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQH0
      UniProtKB/TrEMBL
      A0A178VZ14, A0A5S9X1X3, A0A654F7D5
      Conserved Domains (1) summary
      PLN02422
      Location:1 → 232
      PLN02422; dephospho-CoA kinase

    2. NM_179771.3 → NP_850102.1  dephospho-CoA kinase family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850102.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQH0
      UniProtKB/TrEMBL
      A0A178VZ14, A0A5S9X1X3, A0A654F7D5
      Conserved Domains (1) summary
      PLN02422
      Location:1 → 232
      PLN02422; dephospho-CoA kinase

    3. NM_001336118.1 → NP_001324075.1  dephospho-CoA kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQH0
      UniProtKB/TrEMBL
      A0A178VZ14, A0A5S9X1X3, A0A654F7D5
      Conserved Domains (1) summary
      PLN02422
      Location:1 → 232
      PLN02422; dephospho-CoA kinase

    4. NM_001336119.1 → NP_001324076.1  dephospho-CoA kinase family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQH0
      UniProtKB/TrEMBL
      A0A178VZ14, A0A5S9X1X3, A0A654F7D5
      Conserved Domains (1) summary
      PLN02422
      Location:1 → 232
      PLN02422; dephospho-CoA kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZQH0.1

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