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    HSP40/DnaJ peptide-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816577, updated on 18-Sep-2024

    Summary

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    Official Full Name
    HSP40/DnaJ peptide-binding protein
    Primary source
    TAIR:AT2G20550
    Locus tag
    AT2G20550
    See related
    Araport:AT2G20550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13C7.14; T13C7_14
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (8845802..8847311, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene FASCICLIN-like arabinogalactan 6 Neighboring gene prohibitin 6 Neighboring gene mitochondrial editing factor 21 Neighboring gene miscRNA Neighboring gene DNAJ heat shock family protein Neighboring gene taximin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001036303.1
    NM_127615.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    HSP40/DnaJ peptide-binding protein
    NP_001031380.1
    • HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_179645.1
    • HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT2G20560.1); Has 11261 Blast hits to 11178 proteins in 2681 species: Archae - 101; Bacteria - 6256; Metazoa - 1091; Fungi - 651; Plants - 711; Viruses - 2; Other Eukaryotes - 2449 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8845802..8847311 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036303.1 → NP_001031380.1  HSP40/DnaJ peptide-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031380.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2J4, A0A5S9WZR8, Q9SIL4
      Conserved Domains (1) summary
      cd10747
      Location:108 → 271
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    2. NM_127615.3 → NP_179645.1  HSP40/DnaJ peptide-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179645.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W2J4, A0A5S9WZR8, Q9SIL4
      Conserved Domains (1) summary
      cd10747
      Location:108 → 271
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
    Nucleotide Protein
    Heading Accession and Version

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