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    scramblase-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815041, updated on 18-Sep-2024

    Summary

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    Official Full Name
    scramblase-like protein
    Primary source
    TAIR:AT2G04940
    Locus tag
    AT2G04940
    See related
    Araport:AT2G04940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1O13.7; F1O13_7
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    12
    Sequence:
    Chromosome: 2; NC_003071.7 (1735963..1740568, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Putative membrane lipoprotein Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_126526.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phospholipid scramblase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in plasma membrane phospholipid scrambling IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    scramblase-like protein
    NP_565319.1
    • scramblase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Scramblase (InterPro:IPR005552); Has 427 Blast hits to 416 proteins in 142 species: Archae - 0; Bacteria - 29; Metazoa - 228; Fungi - 113; Plants - 38; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      1735963..1740568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126526.3 → NP_565319.1  scramblase-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565319.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EWZ5, Q8LGK3, Q9SI32
      Conserved Domains (1) summary
      pfam03803
      Location:150 → 379
      Scramblase
    Nucleotide Protein
    Heading Accession and Version

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