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    slc26a4.3 solute carrier family 26 member 4 gene 3 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 779605, updated on 4-Nov-2024

    Summary

    Official Symbol
    slc26a4.3provided by Xenbase
    Official Full Name
    solute carrier family 26 member 4 gene 3provided by Xenbase
    Primary source
    Xenbase:XB-GENE-950380
    See related
    Ensembl:ENSXETG00000012196 AllianceGenome:Xenbase:XB-GENE-950380
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    eva; pds; dfnb4; tdh2b; pendrin; slc26a4
    Summary
    Predicted to enable monoatomic anion transmembrane transporter activity and secondary active sulfate transmembrane transporter activity. Predicted to act upstream of or within inorganic anion transmembrane transport. Predicted to be located in membrane. Is expressed in dermal system. Human ortholog(s) of this gene implicated in Pendred Syndrome; autosomal recessive nonsyndromic deafness 4; and goiter. Orthologous to human SLC26A4 (solute carrier family 26 member 4). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See slc26a4.3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (76303532..76320465, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (66670068..66686443, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 26 member 3 gene 3 Neighboring gene Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase Neighboring gene solute carrier family 26 member 4 gene 2 Neighboring gene B cell receptor-associated protein 29

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    pendrin
    Names
    solute carrier family 26 (anion exchanger), member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001113663.1NP_001107135.1  pendrin

      See identical proteins and their annotated locations for NP_001107135.1

      Status: PROVISIONAL

      Source sequence(s)
      BC157508
      UniProtKB/TrEMBL
      A0JM84, A9UM38, F7AJV2
      Related
      ENSXETP00000026669.3, ENSXETT00000026669.5
      Conserved Domains (1) summary
      TIGR00815
      Location:66723
      sulP; high affinity sulphate transporter 1

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      76303532..76320465 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012959207.2XP_012814661.1  pendrin isoform X1

      See identical proteins and their annotated locations for XP_012814661.1

      UniProtKB/TrEMBL
      A0JM84, A9UM38, F7AJV2
      Conserved Domains (1) summary
      TIGR00815
      Location:66723
      sulP; high affinity sulphate transporter 1