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    fryl FRY like transcription coactivator [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 779572, updated on 4-Nov-2024

    Summary

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    Official Symbol
    frylprovided by Xenbase
    Official Full Name
    FRY like transcription coactivatorprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-5870591
    See related
    Ensembl:ENSXETG00000004391 AllianceGenome:Xenbase:XB-GENE-5870591
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    fry
    Summary
    Predicted to act upstream of or within cell morphogenesis. Orthologous to human FRYL (FRY like transcription coactivator). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See fryl in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    69
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (38936457..39121234, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (29771115..29954289, complement)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 10 member 4 Neighboring gene zygote arrest 1 Neighboring gene OCIA domain containing 1 Neighboring gene uncharacterized LOC116408462 Neighboring gene OCIA domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within cell morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein furry homolog-like
    Names
    FRY-like
    furry

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      38936457..39121234 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012955689.3 → XP_012811143.1  protein furry homolog-like isoform X9

      UniProtKB/TrEMBL
      A0A8J0SDZ1, F6X3A2
      Related
      ENSXETP00000021636.5, ENSXETT00000021636.5
      Conserved Domains (3) summary
      pfam14222
      Location:116 → 663
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2013 → 2266
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:701 → 1877
      MOR2-PAG1_mid; Cell morphogenesis central region

    2. XM_012955686.3 → XP_012811140.1  protein furry homolog-like isoform X6

      UniProtKB/TrEMBL
      A0A8J0S6M6, F7CWF6
      Conserved Domains (3) summary
      pfam14222
      Location:179 → 726
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2076 → 2329
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:764 → 1940
      MOR2-PAG1_mid; Cell morphogenesis central region

    3. XM_002933447.5 → XP_002933493.2  protein furry homolog-like isoform X4

      UniProtKB/TrEMBL
      A0A8J0QNF2, F7CWU2
      Conserved Domains (3) summary
      pfam14222
      Location:209 → 741
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2091 → 2344
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:779 → 1955
      MOR2-PAG1_mid; Cell morphogenesis central region

    4. XM_004911205.4 → XP_004911262.1  protein furry homolog-like isoform X1

      UniProtKB/TrEMBL
      A0A8J0R016, F7CWU2
      Conserved Domains (3) summary
      pfam14222
      Location:209 → 756
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2106 → 2359
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:794 → 1970
      MOR2-PAG1_mid; Cell morphogenesis central region

    5. XM_012955685.3 → XP_012811139.1  protein furry homolog-like isoform X5

      UniProtKB/TrEMBL
      A0A8J0SB13, F7CWU2
      Related
      ENSXETP00000009564.6, ENSXETT00000009564.6
      Conserved Domains (3) summary
      pfam14222
      Location:209 → 741
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2091 → 2344
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:779 → 1955
      MOR2-PAG1_mid; Cell morphogenesis central region

    6. XM_012955683.3 → XP_012811137.1  protein furry homolog-like isoform X2

      UniProtKB/TrEMBL
      A0A8J0SCW3, F7CWU2
      Conserved Domains (3) summary
      pfam14222
      Location:209 → 756
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2106 → 2359
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:794 → 1970
      MOR2-PAG1_mid; Cell morphogenesis central region

    7. XM_012955684.3 → XP_012811138.1  protein furry homolog-like isoform X3

      UniProtKB/TrEMBL
      A0A8J0SDY2, F7CWU2
      Conserved Domains (3) summary
      pfam14222
      Location:209 → 756
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2106 → 2359
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:794 → 1970
      MOR2-PAG1_mid; Cell morphogenesis central region

    8. XM_002933446.5 → XP_002933492.1  protein furry homolog-like isoform X10

      UniProtKB/TrEMBL
      A0A6I8QGK6, A0A8J0QM90
      Related
      ENSXETP00000070174.2, ENSXETT00000098068.2
      Conserved Domains (3) summary
      pfam14222
      Location:167 → 699
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2049 → 2302
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:737 → 1913
      MOR2-PAG1_mid; Cell morphogenesis central region

    9. XM_012955688.3 → XP_012811142.1  protein furry homolog-like isoform X8

      UniProtKB/TrEMBL
      A0A6I8QGK6, A0A8J0SCW9
      Related
      ENSXETP00000067673.2, ENSXETT00000089369.2
      Conserved Domains (3) summary
      pfam14222
      Location:167 → 699
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2049 → 2302
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:737 → 1913
      MOR2-PAG1_mid; Cell morphogenesis central region

    10. XM_012955687.3 → XP_012811141.1  protein furry homolog-like isoform X7

      UniProtKB/TrEMBL
      A0A8J0SDQ3, F7CWF6
      Related
      ENSXETP00000009575.5, ENSXETT00000009575.5
      Conserved Domains (3) summary
      pfam14222
      Location:167 → 714
      MOR2-PAG1_N; Cell morphogenesis N-terminal
      pfam14225
      Location:2064 → 2317
      MOR2-PAG1_C; Cell morphogenesis C-terminal
      pfam14228
      Location:752 → 1928
      MOR2-PAG1_mid; Cell morphogenesis central region
    Nucleotide Protein Strain
    Heading Accession and Version

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