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    fam135a family with sequence similarity 135 member A [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 779489, updated on 5-Mar-2024

    Summary

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    Official Symbol
    fam135aprovided by Xenbase
    Official Full Name
    family with sequence similarity 135 member Aprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-993079
    See related
    Ensembl:ENSXETG00000017907
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See fam135a in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (93111187..93174330, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (91149638..91213018)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene beta-1,3-glucuronyltransferase 2 Neighboring gene small ArfGAP 1 Neighboring gene succinate dehydrogenase complex assembly factor 4 Neighboring gene collagen, type IX, alpha 1 Neighboring gene collagen, type XIX, alpha 1 Neighboring gene uncharacterized LOC108647686

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein FAM135A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      93111187..93174330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031902992.1 → XP_031758852.1  protein FAM135A isoform X1

      UniProtKB/TrEMBL
      A0A6I8RHR3, F7CBZ8
      Conserved Domains (2) summary
      pfam05057
      Location:1258 → 1453
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:110 → 170
      DUF3657; Protein FAM135

    2. XM_004914503.4 → XP_004914560.1  protein FAM135A isoform X2

      UniProtKB/TrEMBL
      A0A6I8PVW9, A0A6I8RHR3
      Related
      ENSXETP00000059692.2, ENSXETT00000061562.3
      Conserved Domains (2) summary
      pfam05057
      Location:1232 → 1427
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:110 → 170
      DUF3657; Protein of unknown function (DUF3657)

    3. XM_031902991.1 → XP_031758851.1  protein FAM135A isoform X1

      UniProtKB/TrEMBL
      A0A6I8RHR3, F7CBZ8
      Related
      ENSXETP00000038829.4, ENSXETT00000038829.4
      Conserved Domains (2) summary
      pfam05057
      Location:1258 → 1453
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:110 → 170
      DUF3657; Protein FAM135

    4. XM_004914506.4 → XP_004914563.1  protein FAM135A isoform X5

      UniProtKB/TrEMBL
      A0A6I8SMD4, A0A8J0R469
      Conserved Domains (2) summary
      pfam05057
      Location:1088 → 1283
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:110 → 170
      DUF3657; Protein of unknown function (DUF3657)

    5. XM_004914505.4 → XP_004914562.1  protein FAM135A isoform X4

      UniProtKB/TrEMBL
      A0A6I8SMD4, A0A8J0R3J4
      Conserved Domains (2) summary
      pfam05057
      Location:1114 → 1309
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:110 → 170
      DUF3657; Protein of unknown function (DUF3657)

    6. XM_018094346.2 → XP_017949835.1  protein FAM135A isoform X6

      UniProtKB/TrEMBL
      A0A6I8RYE7, A0A6I8SMD4
      Related
      ENSXETP00000089762.2, ENSXETT00000098387.2

    7. XM_004914504.4 → XP_004914561.1  protein FAM135A isoform X3

      UniProtKB/TrEMBL
      A0A6I8SFP7, A0A6I8SMD4
      Related
      ENSXETP00000091279.2, ENSXETT00000104533.2
      Conserved Domains (2) summary
      pfam05057
      Location:1124 → 1319
      DUF676; Putative serine esterase (DUF676)
      pfam12394
      Location:110 → 170
      DUF3657; Protein of unknown function (DUF3657)
    Nucleotide Protein Strain
    Heading Accession and Version

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