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    CG42240 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 7354471, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG42240provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0250869
    Locus tag
    Dmel_CG42240
    See related
    AllianceGenome:FB:FBgn0250869
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15893; Dmel\CG42240
    Orthologs
    all
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    Genomic context

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    See CG42240 in Genome Data Viewer
    Location:
    5F1-5F2; 1-16 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6330842..6333028)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6224875..6227061)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene NADH dehydrogenase (ubiquinone) B16.6 subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Trithorax group protein dMLL3/4 instructs the assembly of the zygotic genome at fertilization. Prudêncio P, et al. EMBO Rep, 2018 Aug. PMID 30037897, Free PMC Article
    2. Microbiota-induced changes in drosophila melanogaster host gene expression and gut morphology. Broderick NA, et al. mBio, 2014 May 27. PMID 24865556, Free PMC Article
    3. Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila. Meltzer H, et al. Nat Commun, 2019 May 8. PMID 31068592, Free PMC Article
    4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42240-PA
    CG42240-PB
    CG42240-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      6330842..6333028
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298013.1 → NP_001284942.1  uncharacterized protein Dmel_CG42240, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284942.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z128, Q7K0D1

    2. NM_001272340.2 → NP_001259269.1  uncharacterized protein Dmel_CG42240, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259269.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PH63

    3. NM_001144692.2 → NP_001138164.1  uncharacterized protein Dmel_CG42240, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138164.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z128, Q7K0D1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PH63 M9PH63
    Q7K0D1 Q7K0D1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
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